| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0526 |
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| Symbol | |
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| ID | 4479717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 616916 |
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| End bp | 618280 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639725059 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_868172 |
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| Protein GI | 117918980 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGAAA TCGGTAAGCC TGCTCCCGCA GAAACACGTT GGAAACGGTG GTTGTTAGTA
CTCGACCCCG AGCAATGTCT GCCGGAGTGT AGTGAAGAAC TGAAACAAGC GGCTTGGAAC
TGTGTAAAAG CAGTGTCGGC GGCCGAAGCC TTAGTATTGC TGCAAAAATA TGAGTTGCGC
GTCGCCATTG CCTTTATCAG CGACACTAAC CAAACTGCGC TGGCGAAAGA AATTGCCATT
ATTCAAGCCG AATATCCCTC CTTGCATTGG ATTGCCGTTA CCGATAGCGC CTTGGAGCAG
CATTGCAGCT GGCTCAGCGC CGCTAATTTT GTTGATTATT ACCATCGCCC ATTTGATTGG
AATCGCTTTG CCGATACCCT TGGACACGCT TGGGGCATGG CGCAGTTGAC GCCATCGAAA
GGAGGGAAGG GACCTGCAAA GGTTTTAACG ACCATTAAGG GGGAGCATCC CTTATTGCAA
CAGCTGCGTC AGCGGCTGCA TAAATTTAGT CAGTCGGATG AAACCGTATT ACTGAGCGGT
GAAACGGGCT CTGGCAAAGG ACTATGTGCT AAAACCTTAC ATAGTTTATC TAAAAGGCAC
GAAGGGCCAT TTATCACAGT CAATTGTGGC GCGCTGCCTA CAGGGCTTAT CCATTCCACC
CTCTTTGGCC ATGAGAAAGG CGCCTTTACC GACGCCGATA AACGGTATAT CGGTCATTTA
GAGCAGGCCC ATGGTGGGAC ACTGTTTTTA GATGAAATTG CCGATCTCCC CTTAGACTTA
CAGGTCAACT TACTGCACTT TTTGGATGAT AAACACATTA TGCGAATTGG CGGCAATGCG
CCCATAAAAG TGGATTGCCG TTTGTTATTT GCCTCCCACC AGGATTTAGA GGCCGCGATT
GACGAAGGCC GCTTTCGTGA AGATTTATAT CACCGTATCA ATGTGTTACG CCTGCATGTG
CCAAGTTTGA GACAGTATAG CGACGAGGTC ATGCTGCTCG CCGAACAATT CTTGTTAGAA
CATTCGGACA ACTGTACTCA GTTTCATTTT AGTGACGAGG CCCGCTGTGC GATGAAACAC
TACAATTGGC CGGGCAATGT GCGGGAGCTG CGTAACCGGA TCCGCCGGGC TATGGTCTTA
ACCGATGACT GCATTATTAC TGCGCAGTTG TTAGGGCTAG ATTCACTCAC GGCAAACCGT
ACCAGCCAAG ATCTCGCGCG CTGCCGCGCA GAGCATGAGG CAGAAGTATT ACTGAAAGCC
ATTAGCGACC ATAAACATAA TATTTCCGCC GCCGCCCGCT CATTAAATAT CTCCAGAGCG
ACCTTCTATC GACTCCTGAA AAAGTGTCAG ATCAAGGTGC CTTAG
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| Protein sequence | MDEIGKPAPA ETRWKRWLLV LDPEQCLPEC SEELKQAAWN CVKAVSAAEA LVLLQKYELR
VAIAFISDTN QTALAKEIAI IQAEYPSLHW IAVTDSALEQ HCSWLSAANF VDYYHRPFDW
NRFADTLGHA WGMAQLTPSK GGKGPAKVLT TIKGEHPLLQ QLRQRLHKFS QSDETVLLSG
ETGSGKGLCA KTLHSLSKRH EGPFITVNCG ALPTGLIHST LFGHEKGAFT DADKRYIGHL
EQAHGGTLFL DEIADLPLDL QVNLLHFLDD KHIMRIGGNA PIKVDCRLLF ASHQDLEAAI
DEGRFREDLY HRINVLRLHV PSLRQYSDEV MLLAEQFLLE HSDNCTQFHF SDEARCAMKH
YNWPGNVREL RNRIRRAMVL TDDCIITAQL LGLDSLTANR TSQDLARCRA EHEAEVLLKA
ISDHKHNISA AARSLNISRA TFYRLLKKCQ IKVP
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