Gene Shewana3_0511 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0511 
Symbol 
ID4479702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp602225 
End bp602659 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content51% 
IMG OID639725044 
Product3-dehydroquinate dehydratase 
Protein accessionYP_868157 
Protein GI117918965 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0757] 3-dehydroquinate dehydratase II 
TIGRFAM ID[TIGR01088] 3-dehydroquinate dehydratase, type II 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCATA AAGTTCTGCT CATCAATGGC CCCAATTTAA ACCTCCTTGG CCGCCGTGAG 
CCCAGTGTTT ACGGTCATCA AACCTTAGCC GATATTGTTG CCCTTTTGAG TGAACAAGCT
CAAGCAGCAG GTGTTGAACT TGAACATATT CAATCGAATG CCGAATTTGA GCTGATCAAC
GCTATCCATG CCACCGATGC GCAGATGATC ATTATCAACC CCGCAGCCTT TACCCACACC
AGTGTGGCCC TGCGTGACGC ACTGCTTGGG GTGGACATCC CCTTCTTTGA AGTGCATTTA
TCCAATGTCC ATGCCCGCGA GCCCTTCCGC CACCACTCCT ATTTGTCCGA TAAGGCCATT
GGGGTGATTT GTGGTTTCGG CGCCCAAGGC TATGAGTTTG CCCTCGCAGC GGCGATTAAG
AGATTGAAGG CATAA
 
Protein sequence
MNHKVLLING PNLNLLGRRE PSVYGHQTLA DIVALLSEQA QAAGVELEHI QSNAEFELIN 
AIHATDAQMI IINPAAFTHT SVALRDALLG VDIPFFEVHL SNVHAREPFR HHSYLSDKAI
GVICGFGAQG YEFALAAAIK RLKA