Gene Shewana3_0496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0496 
Symbol 
ID4476725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp578480 
End bp579754 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content53% 
IMG OID639725029 
Productperiplasmic copper-binding 
Protein accessionYP_868142 
Protein GI117918950 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3420] Nitrous oxidase accessory protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGCGCA GCTTGCTGCT CGGTTGGCTC TGTAGCTTAT CCCTTGTTGG GTTGGCGCAG 
GAGTTTAGGG TCACAGATAC TGCGGCTTTG ACCCAAGCCC TCGCGCGGGC GCAGGATGGC
GACACTGTTG TGCTCGCCAC CGCCGTTTAC GAAGGTAATT TTAGTGTCAG CCGCACGATT
CATCTTAAGG GCGAAGCGGG TGCAACCCTA GATGCCTTGC GTCAAGGTAG CGCCTTAACC
ATTGCTGCGC CCAAGGTGAT AGTCGAAGGG CTGAATATCC GTCACTGGGG GCGGGATCTT
TATTACCAGA ATGCGGGGAT CTTGCTGCAA CCCGGGGCTG ACGAAGTGCT CATTAAGGGC
AATCGGCTGG TGGGTGATGG CTTTGGTATC TATGGCGAGC AGCTGAGTGC ACCCCGCATT
AGGGAAAACA GTATCAGCGG TAATGGCGCC ATTTATGTTT TGGATAGGGG CGATGGCGTC
TTCCTCAAGC ATGTGAGCGC GCCGCAAGTG CAAGATAACC ATTTTATTTT TGTCCGCGAT
GGTGTGTATC TCGAGTCGGT GACAGACAGC CAAATCCACC ATAATCAATT CGCTAAGCTG
CAATACGGCA TCCATTACAT GTACACCCGA GGCGATGAAG CCTCAAACAA TCAAGCCATT
AGCGTCGATG GCGGTTATGC CTTGATGAAC TCGCAGCACA TCTTTCTACA CCACAACAAG
GTCAGCCAAG CACGGGACTT TGGCATTCTG CTCAATATCA CAAACGATGC CCATGTTCAG
GCAAATGTCG CGACAGAGGT GGTCAATCCC CAAGGTTCAG TGGAGCTTGG CAATGAGGGC
AAGGGCATTT TTATCTACGC CGCGCAGAAT AATCGCATCG AGGCGAATGA GTTTAGCCAT
AGCGATACAG GGATCAGCAT GGCCATGGGC GGCGAAGCAA ACCGCCTCTG GCATAACCGC
ATTGTCGCCA ACCAAACCCA AGTCAAATAC GTTGGCGAGG CGCAACTCGA GTGGAGTTAT
CAGGGGCAGG GCAATTACTG GTCCGAATAT CAGGGTTGGG ACACGAATGG CGATGGCGTC
GGGGATATAG TCCATCGGCC CAACGACAGC TTAGACAAAC TCTTTTGGCT CTATCCCGAG
GCAAAACTCC TGATGGAAAG CCCTGTGGTC TTACTGCTGC GTTGGGTGGA GCGGCAGTTT
CAGCCAACGG CTGCAAGTGG TGTGAGTGAC AGCTTTCCCT TAATGGGATG GAAAACCGAG
GGAGATGGGC AATGA
 
Protein sequence
MWRSLLLGWL CSLSLVGLAQ EFRVTDTAAL TQALARAQDG DTVVLATAVY EGNFSVSRTI 
HLKGEAGATL DALRQGSALT IAAPKVIVEG LNIRHWGRDL YYQNAGILLQ PGADEVLIKG
NRLVGDGFGI YGEQLSAPRI RENSISGNGA IYVLDRGDGV FLKHVSAPQV QDNHFIFVRD
GVYLESVTDS QIHHNQFAKL QYGIHYMYTR GDEASNNQAI SVDGGYALMN SQHIFLHHNK
VSQARDFGIL LNITNDAHVQ ANVATEVVNP QGSVELGNEG KGIFIYAAQN NRIEANEFSH
SDTGISMAMG GEANRLWHNR IVANQTQVKY VGEAQLEWSY QGQGNYWSEY QGWDTNGDGV
GDIVHRPNDS LDKLFWLYPE AKLLMESPVV LLLRWVERQF QPTAASGVSD SFPLMGWKTE
GDGQ