Gene Shewana3_0493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0493 
Symbol 
ID4476722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp576222 
End bp576929 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content53% 
IMG OID639725027 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_868140 
Protein GI117918948 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.569841 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGAAA ATATAGAGAG ACGGAGGTTC CTTAAAAGCG CTGGCATGTG CTCTTTGATG 
TTAACGCCTT TAGCCGGGTG TTCGGTCAAA GAAGAGTCCG ACGGCGCCCA TAAGCCCCAT
TACGTCATGG TCTTTGACCA AAACAAGTGT GTCGGCTGTG GCGACTGTAA AACCGCCTGT
AATCAAGCCA ACCAGTTGCC CGAAGGCAAG TCACGGGTGC TGCTCGAGCA GCAGAGTGGC
CGTGTCGAAG GTCAGCCTTG TCCGCACTGC GGCAAGATGA GCTGTGACTG TGAACGTAAG
TTTGTGCGGG TTTCCTGCCA GCAATGCAAG AACGCCCCCT GTGTCACAGT TTGTCCGACT
GGCGCGGCGC ACCGCGACGC GAAAACGGGC ATTGTGACTA TGGATGCGAG CAAATGCGCC
GGCTGTAAAT ACTGCATTGG TGCTTGTCCT TACAATGCCC GTTACATCAA CAGCGATACG
GATGTGGCCG ATAACTGCGA TTTCTGTTTG AACAGCAAGT TAGCTAAGGG CGAATTACCC
GCCTGTGTGC AGAGCTGTAA ATACGATGCG CTGATCTTCG GTGATGCCAA CGATCCTCAA
TCCTACGTAA GCAAACTCTT AGCGGTAAAA GACTCAGTGC GCATTAAGCC GCAGTTTGGC
ACCGAGCCGA GCTTACGTTA CATACCAATC GTCAAACTGG GAGTGTAA
 
Protein sequence
MSENIERRRF LKSAGMCSLM LTPLAGCSVK EESDGAHKPH YVMVFDQNKC VGCGDCKTAC 
NQANQLPEGK SRVLLEQQSG RVEGQPCPHC GKMSCDCERK FVRVSCQQCK NAPCVTVCPT
GAAHRDAKTG IVTMDASKCA GCKYCIGACP YNARYINSDT DVADNCDFCL NSKLAKGELP
ACVQSCKYDA LIFGDANDPQ SYVSKLLAVK DSVRIKPQFG TEPSLRYIPI VKLGV