Gene Shewana3_0487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0487 
Symbol 
ID4476716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp568921 
End bp569340 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content54% 
IMG OID639725021 
Productcytochrome C biogenesis protein 
Protein accessionYP_868134 
Protein GI117918942 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3088] Uncharacterized protein involved in biosynthesis of c-type cytochromes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCGC TGTTTCGCTC GCCCTATTTG AGCCTCTTAT TTTGGTTGCT GTCACTGAGC 
CTCTGCTTTG GCGGCGCGAC ATTTCTCGCC ACGGCGCAGG AGGCCCCCAA CCTTGGCGCC
TCCTACCAAC AGCAAGCCAT AGAGATCAGT AAAGTGCTGC GCTGCCCTAT GGCAACCAAT
CAAACCTTAT TTGAGTCGCA AGCGCCGATT GCCCATGAGC TTAAAGGGCA AATCTTTTCA
CTGTTGGAAC AAGGCTATAA GCGGGACGAG ATCCTCGATT TTATGGTGCA GCGCTACGGC
GAAAAAATCC GTTATCAGCC CGAATTTAAG CCCGCCACAC TGGCACTCTG GCTCGGCCCG
ATCGTGCTGC TGGTCGTGGG GTTGGGTTTA GGGCTAGCCC TAATAAAACG CAGGCCATAG
 
Protein sequence
MNPLFRSPYL SLLFWLLSLS LCFGGATFLA TAQEAPNLGA SYQQQAIEIS KVLRCPMATN 
QTLFESQAPI AHELKGQIFS LLEQGYKRDE ILDFMVQRYG EKIRYQPEFK PATLALWLGP
IVLLVVGLGL GLALIKRRP