Gene Shewana3_0442 details

Gene Information

• Locus tag: Shewana3_0442
• Symbol: zntR
• ID: 4479349
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella sp. ANA-3
• Kingdom: Bacteria
• Replicon accession: NC_008577
• Strand: +
• Start bp: 517722
• End bp: 518195
• Gene Length: 474 bp
• Protein Length: 157 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 639724978
• Product: zinc-responsive transcriptional regulator
• Protein accession: YP_868091
• Protein GI: 117918899
• COG category: [K] Transcription
• COG ID: [COG0789] Predicted transcriptional regulators
• TIGRFAM ID: [TIGR02043] Zn(II)-responsive transcriptional regulator

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 27
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTACCGAA TTGGTGAGTT AGCCGATTTA TGCGAGGTTA AGGCCGACAC CCTCAGATTC 
TATGAGAAAC ACGGCCTGCT TTCGCCTTCG AGCCGTACCG ACTCTGGCTA TCGGGTCTAT 
ACCGATGCCG ACGCGGCGCG GCTGCGTTTT ATTCTGCGGG CGAAGGCGGT GGGTTTTACC 
TTAAGTGAAA TCAGTGAGTT GTTGTCTATC GACCTCGACA AATCCAACTG GGCCTGTGCC 
GATGTTAAGG GCATGGTCGA TCTCAAGCTG GCGCAGGTGC AAGCCAAAAT TGCCGAGTTA 
TTGCATTTTC AAACCAGTTT ACAGAGTCTG TCGGATGCCT GCTGCGGCGG GCCGCGTAGC 
GCCGAACATT GCTCGATTTT AGAAGCGCTA GAGTCGAGTA CCGAACAAGT ACGCGTTGAG 
CATGACCATG GCGCTACAGA TTGCACCACA ACCCTAGATA AGTCAGGGAA TTAA 

 

Protein sequence

MYRIGELADL CEVKADTLRF YEKHGLLSPS SRTDSGYRVY TDADAARLRF ILRAKAVGFT 
LSEISELLSI DLDKSNWACA DVKGMVDLKL AQVQAKIAEL LHFQTSLQSL SDACCGGPRS 
AEHCSILEAL ESSTEQVRVE HDHGATDCTT TLDKSGN