| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0430 |
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| Symbol | |
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| ID | 4479337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 496353 |
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| End bp | 498572 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 639724966 |
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| Product | patatin |
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| Protein accession | YP_868079 |
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| Protein GI | 117918887 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.2569 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.405948 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGTC GAATACTCGC TTCTGTCTTT TTATGTTTTT TGCTAACGCC CTTGTATGCG
GCGGAACGAC CTAAGGTTGG GCTGGTACTC AGTGGTGGCG GCGCTAAAGG TGCTGCGCAC
GTGGGCGTGC TTAAAATCCT AGAAGAACAT CATATTCCCG TGGACTACAT CGCAGGTACC
AGTATCGGTG CCTATGTTGC TGGCATGTAC TCTTTGGGCT ACAGCGCGAG TGAAGTCGAA
GCCATTATGA TGGGGGTCGA TTGGGACAGC GGTTATTCGG ATACCATTCC GCGTAACGTC
TTGAGTTATC GAGATAAGCA GTTACGTGAT CGTTACAATA TTCCGCTCAA CATAGGTTAC
AACGAAGGAG AGGTTAGGGC ACCGAGTGGA TTGTTGCGTG GGCAAACCAT GTCGCAGCTA
TTACGCCAAT CAACCGATCT GGTACAGCAA TTTGGCGATT TTGATGCCTT AGCCATTCCC
TATCGTGCGG TCGCGACGGA TTTAGAAACC AGTTTGCCCG TCGTCATCGA CCACGGCAGT
TTAGTCAAAG CCATGCAGGC ATCTGCGACT GTGCCGGGTG CACTGCAACC GACTCAGATC
GATGGCAAGT TATTAGTCGA TGGCGGTATT GCCAACAATA TGCCCGTGGA TGTGGTTAAG
GCTATGGGCG CGGATATCAT TATTGCCGTA GATATCGGCT CGCCGCTGGT GAAAAAAGAC
AAACTGGACA GCACGATTGC GGTGCTCGAC CAGTTATCAA ATTTTTTGAC CAATGCCAGT
ACCGAAAAGC AAAAACAATT ACTGACAGAT AAAGACGTAT TGATCCGTCC CGCTATCGAT
GCCTTAAGCA CCACAGACTT TACCATCATG CCCTTGGCCC TGACGCTGGG GAAAGAAGCC
GCCAACGGTC AGTTAGATAA ATTGCAGAGC ATGAGTGTCA GCGCCGAAGA ATATGCCGCC
TATGTGGATG CGAAGAAGGC TAAGGGCAAG TTATTAATGG CGGATGTGGC GCATCCTATT
AAAGAAATCG TATTCGATAA CCAATCTAAG GTTAGTCTGA ACCTATTGAA GGAAACCTTA
GATCTGAAAG CCGGCCAAGC CGTGACTAAA GATGAGCTAA ACGAGGCGTT AAAACGGATT
TATGCCTTAA ACAAATTTGA GCGCGTGGAT GCTGAGTTTG TGGAAGGCGA AGAAGGCCGG
GTATTGACTG TGACTACCCG TGCGAAATCC TGGGGGCCAA ATTACTTCCA ACTCGGCTTT
AACTGGGAAG ATGACTTTAG TACCGATTCG GCCATCAGTT TCGACATGGC TTATACCATG
ACCGACTTAA CCTTTAATGG TGGAGAGTGG CGTAACGAGG TCAAGCTAGG GTTCGAAAAG
CTATTTGCAA CCGAGTTTTA TCAACCCTTG GATAGGGATC AGGATTTTTA TAGTCGAGCT
CGTTATCAAT ACGATATCCA TAATTGGGAT ATATACGATA ACAATAACCG TGCCCTTATT
TTCAATAAGA AGACTCATAC GATTGAAATG GGTATAGGTT ATAACTATGT CCCTCAAGGT
GTTATTGAAT TGGGCTTGGT TGCGGAAAAG GGGGTTATTA TTAATGATGC ATGGCTAGTT
AAAGATTTTG ATTTTAACTC CTATGGTGCT TATCTAAGAG TGGGTTATGA CAGCCTAGAC
AGCATTAGCT TCCCAACATC TGGTAATCGC ATAACGCTAA ACGTTTATGT ACGTAATGAG
AATTTTGATG ATGTCGTCGA TAACAATGAC ACTGACTACA GTGTTCAGAT AGAAGCCGAT
TGGAAAGGGG CGTTAAGTGT GGGTAATCAT TCCTTTGTAG GCAAAGCATC ATTGGCGACT
ATCAATAACG ACAGTAGTAA TAGCTTACAT TTATCGGATT TAGGCGGTTT CTTAAATCTT
TCTGGCTACC ATAAAGATTC ATTAAATGGC GACCATAAGC TCTTTGGTGC CTTTGTCTAT
CAGTATGATC TGGGCCGAGA TGCCTTATTA GGTATGAGAG ATTACCCACT CTATTTAGGG
CTAAGTTTAG AGGCGGGAAA TGTATGGTAT GAACGCTCAG AGGTATCCCT CTCAGACCTT
ATCTATGCTT CTAGCCTTTA CATAGGTACA GATACTTCTA TGGGGCCGGC AGCACTGGGC
TTTGGTATTA CAGATATGGG TGATAAATCC TTGTATTTAT TTGTCGGTAA AGCCTTCTAA
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| Protein sequence | MMRRILASVF LCFLLTPLYA AERPKVGLVL SGGGAKGAAH VGVLKILEEH HIPVDYIAGT
SIGAYVAGMY SLGYSASEVE AIMMGVDWDS GYSDTIPRNV LSYRDKQLRD RYNIPLNIGY
NEGEVRAPSG LLRGQTMSQL LRQSTDLVQQ FGDFDALAIP YRAVATDLET SLPVVIDHGS
LVKAMQASAT VPGALQPTQI DGKLLVDGGI ANNMPVDVVK AMGADIIIAV DIGSPLVKKD
KLDSTIAVLD QLSNFLTNAS TEKQKQLLTD KDVLIRPAID ALSTTDFTIM PLALTLGKEA
ANGQLDKLQS MSVSAEEYAA YVDAKKAKGK LLMADVAHPI KEIVFDNQSK VSLNLLKETL
DLKAGQAVTK DELNEALKRI YALNKFERVD AEFVEGEEGR VLTVTTRAKS WGPNYFQLGF
NWEDDFSTDS AISFDMAYTM TDLTFNGGEW RNEVKLGFEK LFATEFYQPL DRDQDFYSRA
RYQYDIHNWD IYDNNNRALI FNKKTHTIEM GIGYNYVPQG VIELGLVAEK GVIINDAWLV
KDFDFNSYGA YLRVGYDSLD SISFPTSGNR ITLNVYVRNE NFDDVVDNND TDYSVQIEAD
WKGALSVGNH SFVGKASLAT INNDSSNSLH LSDLGGFLNL SGYHKDSLNG DHKLFGAFVY
QYDLGRDALL GMRDYPLYLG LSLEAGNVWY ERSEVSLSDL IYASSLYIGT DTSMGPAALG
FGITDMGDKS LYLFVGKAF
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