Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0428 |
Symbol | |
ID | 4479335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 490091 |
End bp | 491518 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639724964 |
Product | dihydrolipoamide dehydrogenase |
Protein accession | YP_868077 |
Protein GI | 117918885 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00251394 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.166632 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAACG AAATCAAAAC TCAGGTAGTG GTATTAGGTG CAGGTCCTGC TGGATATTCT GCTGCCTTCC GTGCGGCTGA CTTAGGTCTG GAAACCGTTA TCGTTGAACG TTTTAGCACT TTAGGTGGCG TGTGTCTGAA CGTGGGTTGT ATCCCATCTA AAGCCCTGTT ACACGTTGCT AAAGTTATCG AAGAAGCCAA AGCCGTTGCT GCACACGGTG TTGTGTTCGG CGAGCCAACA ATCGATTTAG ACAAGTTACG CAGCTTCAAG CAAAAAGTGA TCAGCCAGTT GACTGGTGGC TTAGGCGGCA TGTCTAAAAT GCGTAAAGTA AACGTTGTTA ATGGCTTCGG TAAATTTACT GGCCCTAACA GCTTAGAAGT GACTGCTGAA GACGGTACTG TGACCGTTGT TAAGTTTGAC CAAGCGATTA TCGCTGCGGG TTCTCGCCCA ATCAAACTGC CATTCATTCC CCATGAAGAC CCACGTATTT GGGATTCGAC CGACGCATTA GAACTGAAAG AAGTGCCTGG CAAACTGCTG GTCATGGGCG GCGGTATCAT CGGTTTAGAA ATGGGTACGG TTTACTCTTC TCTGGGCAGT GAAATCGACG TGGTTGAAAT GTTCGACCAA GTGATTCCAG CGGCTGACAA AGACGTTGTT CGCGTATTCA CTAAGCAAAT CAAGAAGAAA TTCAACCTGA TCCTCGAAAC CAAAGTGACT GCGGTTGAAG CCCGTGAAGA CGGTATCTAC GTTTCGATGG AAGGTAAGAG CGCACCAACT GAGCCAGTAC GTTACGATGC AGTGTTAGTG GCTATCGGTC GTACGCCAAA TGGCAAGCTG ATCGACGCTG AAAAAGCAGG CGTTAAGATC GACGAGCGTG GTTTCATCAA CGTAGACAAG CAATTACGTA CAAACGTACC GCACATCTAC GCTATCGGTG ACATCGTTGG TCAACCAATG CTCGCTCACA AAGGCGTGCA CGAAGGCCAC GTAGCGGCCG AAGTGATCGC TGGCATGAAG CACTACTTCG ATCCAAAAGT CATCCCATCA ATCGCTTACA CAGACCCTGA AGTGGCCTGG GTTGGTCTGA CTGAGAAAGA AGCGAAAGAG CAAGGTATTG CTTACGAAAC AGCGACTTTC CCATGGGCTG CCTCTGGCCG TGCTATCGCT TCTGATTGCA GCGAAGGTAT GACTAAGCTG ATTTTCGATA AAGACACTCA CCGCGTAATC GGTGGTGCTA TCGTGGGTGT GAACGGTGGC GAACTGTTAG GCGAAATCGG CCTAGCAATC GAAATGGGTT GTGATGCTGA AGATTTAGCA TTAACTATCC ATGCTCACCC AACGCTGCAC GAGTCAGTAG GTCTAGCGGC TGAAATCTAC GAAGGTTCTA TTACAGACCT GCCAAACCCA AAGGCAAAGA AAAAGTAA
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Protein sequence | MSNEIKTQVV VLGAGPAGYS AAFRAADLGL ETVIVERFST LGGVCLNVGC IPSKALLHVA KVIEEAKAVA AHGVVFGEPT IDLDKLRSFK QKVISQLTGG LGGMSKMRKV NVVNGFGKFT GPNSLEVTAE DGTVTVVKFD QAIIAAGSRP IKLPFIPHED PRIWDSTDAL ELKEVPGKLL VMGGGIIGLE MGTVYSSLGS EIDVVEMFDQ VIPAADKDVV RVFTKQIKKK FNLILETKVT AVEAREDGIY VSMEGKSAPT EPVRYDAVLV AIGRTPNGKL IDAEKAGVKI DERGFINVDK QLRTNVPHIY AIGDIVGQPM LAHKGVHEGH VAAEVIAGMK HYFDPKVIPS IAYTDPEVAW VGLTEKEAKE QGIAYETATF PWAASGRAIA SDCSEGMTKL IFDKDTHRVI GGAIVGVNGG ELLGEIGLAI EMGCDAEDLA LTIHAHPTLH ESVGLAAEIY EGSITDLPNP KAKKK
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