Gene Shewana3_0423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0423 
Symbol 
ID4479330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp482516 
End bp483061 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content48% 
IMG OID639724959 
ProductN-acetyl-anhydromuranmyl-L-alanine amidase 
Protein accessionYP_868072 
Protein GI117918880 
COG category[V] Defense mechanisms 
COG ID[COG3023] Negative regulator of beta-lactamase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000285307 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0465773 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTTG AGTTTGGTTG GTATCGCGCG GCGCGGCGCT GTGAATCACC ACATTTTAAC 
CGTCGGCCCT TTGGAGAGAT CAGCCTGTTG GTGATCCACA ATATTAGTTT GCCCGCGGGA
TGCTTTGGGC TGCCTTATAT TGATCAATTA TTTCAAGGGT GTTTAGATAC CAGTGCCGAT
GAAAGTTTCG CCGATTTAGC TGGGCTGGAG GTGTCGGCTC ATTTTTTAAT TCGCCGCGAT
GGCGAATGTG TGCAGTATGT GAGTTGTGAA GATAGAGCTT GGCACGCGGG TGTATCCCGT
TATGGCGAAA GGGAAAATTG TAATGATTTC TCTATTGGTA TTGAACTTGA AGGTACGGAT
ACTGAACCCT ATACTGCCGC CCAATATCAG CAACTTACCG CATTGACCCA AGCTTTATTG
GCACAATATC CTGCGTTAAC CGCAGAGCGG ATTGTGGGAC ATTGCGATAT TGCACCAATG
CGGAAGACTG ACCCAGGCCC AAGCTTTGAC TGGCAAAGAT ATTTAGCGGC GCTGCGCGAC
TTTTAG
 
Protein sequence
MSFEFGWYRA ARRCESPHFN RRPFGEISLL VIHNISLPAG CFGLPYIDQL FQGCLDTSAD 
ESFADLAGLE VSAHFLIRRD GECVQYVSCE DRAWHAGVSR YGERENCNDF SIGIELEGTD
TEPYTAAQYQ QLTALTQALL AQYPALTAER IVGHCDIAPM RKTDPGPSFD WQRYLAALRD
F