| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0422 |
|---|
| Symbol | |
|---|
| ID | 4479329 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 481358 |
|---|
| End bp | 482239 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 639724958 |
|---|
| Product | nicotinate-nucleotide pyrophosphorylase [carboxylating] |
|---|
| Protein accession | YP_868071 |
|---|
| Protein GI | 117918879 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0157] Nicotinate-nucleotide pyrophosphorylase |
|---|
| TIGRFAM ID | [TIGR00078] nicotinate-nucleotide pyrophosphorylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000801817 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0559204 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTAGAAA ACGATATTCG CCACGCCGTA AAAACCGCCC TCAATGAAGA CCTTGGTGGA
ACAGAGATCA ATGAGCACAG CAAAGCCATT GCCTACGGCG ATATTACCGC CCAACTTATT
CCTGCTGATA AATATGCAGA AGCAACCTTA ATCACCCGTG AAGAAGGCGT TTTTTGCGGA
AAAGCTTGGG CCGAACAAGT CTTTAATCAA TTAGGTGGCG ATGTCGCCCT GCACTGGCAT
GTTGATGATG GCGATCTCGT GTTGCCAAAC CAAGTCTTAT GTGAATTATC AGGCCCTGCC
CGCACCCTGC TGACGGGCGA GCGCACGGCA ATGAACTTTA TTCAGACTTT GTCAGGAGTG
GCGACGCTGA CAAAACACTA TGTCGATAAG TTAGCGGGCA CTCACACACG ACTACTCGAT
ACTCGCAAAA CCATCCCAGG ACTCCGCACG GCTCAAAAAT ACGCAGTCAC CTGTGGCGGC
GGTAAAAACC ATCGAATTGG TTTGTTTGAT GCCTTCTTAA TTAAAGAAAA TCACATTATG
GCCTGCGGTG GCATACGCCA AGCAGTGGAT GCAGCGCGCA GTTTACATCC TAATAAACCC
GTAGAAGTCG AAGTCGAATC CCTAGAAGAA CTGGCATTAG CGCTAGATTC AGGCACAGAT
ATCATTATGT TAGATAACTT CGATATCACC ATGATGGTCG AAGCCGTCGA GCTGAATAAT
CAATACAAGG CTAAAGGCAG CGGTGCAAAA CTCGAAGTCT CAGGCAATGT CACCTTAGAT
ACCTTGGCAG AATTTGCCAA AACTGGGGTT GACTATATCT CCGTTGGCGC CCTCACCAAG
CATGTTCGCG CCTTAGATCT ATCAATGCGG CTGAAAGGCT AG
|
|---|
| Protein sequence | MLENDIRHAV KTALNEDLGG TEINEHSKAI AYGDITAQLI PADKYAEATL ITREEGVFCG
KAWAEQVFNQ LGGDVALHWH VDDGDLVLPN QVLCELSGPA RTLLTGERTA MNFIQTLSGV
ATLTKHYVDK LAGTHTRLLD TRKTIPGLRT AQKYAVTCGG GKNHRIGLFD AFLIKENHIM
ACGGIRQAVD AARSLHPNKP VEVEVESLEE LALALDSGTD IIMLDNFDIT MMVEAVELNN
QYKAKGSGAK LEVSGNVTLD TLAEFAKTGV DYISVGALTK HVRALDLSMR LKG
|
|---|
| |