| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0421 |
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| Symbol | |
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| ID | 4479328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 480325 |
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| End bp | 480753 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 639724957 |
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| Product | methylation site containing protein |
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| Protein accession | YP_868070 |
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| Protein GI | 117918878 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4968] Tfp pilus assembly protein PilE |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000175547 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0256712 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGGTA TCAAAATGAA TAAGAATGCT CAGGGTTTTA CCTTGATCGA ATTAATGATT
GTAGTAGCCA TTATCGGTAT TTTGGCTGCA GTGGCATTAC CTGCTTATCG TGAATATGTT
GCAACCTCGC ATGGTGGTGC ATCAATGAAA GGCCTTGCAG GATATGTAAC TAAGGCCCAA
GCATGTATCC AAACAGGTGT CGGATGCACA ACTCTCGGAA CTGAAATTAC CGCTGACCCA
AAAGTTGATG CAGACCCAGC AGTTACAGAA GCAACTGGAA CAGATTTAAC ATATGATGAC
GGTACTTGTA CTGTTACAGC TACAATCGGT GCTACTGGCG GTGTATCTTA TGCTGCAGAC
ACTAAAGATG CTAATAAAGC AACCAAAAAA CAATGTGAAG AAGGTGCTGG ATTAAAAGCT
AGTAGTTAA
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| Protein sequence | MKGIKMNKNA QGFTLIELMI VVAIIGILAA VALPAYREYV ATSHGGASMK GLAGYVTKAQ
ACIQTGVGCT TLGTEITADP KVDADPAVTE ATGTDLTYDD GTCTVTATIG ATGGVSYAAD
TKDANKATKK QCEEGAGLKA SS
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