Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0420 |
Symbol | |
ID | 4479327 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 478842 |
End bp | 480278 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639724956 |
Product | O-antigen polymerase |
Protein accession | YP_868069 |
Protein GI | 117918877 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000329147 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0182315 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAATAT TGAAATCAAT CCCGATTGTT AGTCGGATTA TCCTGCTCAC TTTCTTCGCG CTATTTTTTC TTGGCTCGGT ATTATCAGGT TATATCACTG GATATCTGGG GGTGGATAAC GCTTACGATC TTAAGCGAAT CCTAGTAATT ATATTTATCG TGTGTTCAGC GGTTGGCCTT TTGTGGCGAC CGAGTATTCC AATAATCGTC ACATCGCCTT TTACACTGTG GGTGGTGGCA AGCCTATTTA TACTCGGTTT GATATCAACC ATTTTTAGCC AGCATCCATT TTGGTCATTC GTTGAGTTAG CTAATTTTTT ATTATTGCTC TGTTTGTTTT ACGTCATTGG TGTATTGATT GCGGATATAG GCAGAACTGC TGCGCTGCAA TACTTTTTTG GGTTTGCATT ATTTTTCTCG ATTTGTATTG CAGTTAAGTT TTTCTTGCTG CTGCTATTTC ATGCCCTTGA TAACAATCGG CCCGATGTGC ATTCTTTAGT GGCTGACTTT ATGAATGTAA GGTTTTTCAA CCAGTTGCAA GTTGCGCTGC TGCCGCTGTT GTGTTTGTCT TTTTATATCG AACCACTTAA AAAATATAAA CGAGTAGCCA TGGTGACCTT TAGTGTGTTG TGGTTAATCC TGCTGCAATC GGAGGCTCGC GGAGCATTAT TAGCGCTGCT AGTGGCGGCT ATTGTGGTGT ATCGCTTTTT GCCCGCCAGC TTTGGTAAAG CATTTATTCG CCCCATTATG AAGGCGGTGG CTTTCGGCAC GCTTTTATGG CTGGTGCTGA TCATTATCAT TCCACTGTTT ATTTTTGATA GCCCAATTTG GCAATTAAGA ACCAATAGCT CTGGCCGGAT TGATATGTGG ATTTATATTT TGCATGCGAT CCCTGAACAT ATTGGCTTAG GTTACGGGCC AATGAGTTTT GCATGGGCAG AAGCAAGACC TTTACCTAAT GCTCACCCAC ATAATGCCCT CATGCAGTTT TTATATGAGT TTGGTGTGGT TGCGTTTATC TTACTGGCGA GTTGGTCGCT AATAACATTA TGGTCAATAT TAAAAAGACT TAAATTATTA GGGGCAAAGT CGAGTGAGCA TTTGGCTAAA AACTCACAAT GTAGCCTCGA CACCAGCTCA CATATAGTCA TAGAGACGGA CACTACCGAT ATAGTGTTGG CATTTGCCCT ATGCGCAATA TGGATTTATG CCATGTTTGA TGGGGTGATT GTAATGCCAT TATCCCAAGC ATTATTGGTG GCATTATTGG CACTTAATTG CCGTCACTAT CAATCGCGAG TAATAACACT GCCATTAAAA GTTGCGTTAG TGGCAATATT AATAACCTGT GGTGCATTGT TAATCGTTAG CCTCGGTGAT ACCGCGCTTA ATCAGCAACT TTATCCAAGA TTATGGTTAA CTGGGATAAT TAATTGA
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Protein sequence | MQILKSIPIV SRIILLTFFA LFFLGSVLSG YITGYLGVDN AYDLKRILVI IFIVCSAVGL LWRPSIPIIV TSPFTLWVVA SLFILGLIST IFSQHPFWSF VELANFLLLL CLFYVIGVLI ADIGRTAALQ YFFGFALFFS ICIAVKFFLL LLFHALDNNR PDVHSLVADF MNVRFFNQLQ VALLPLLCLS FYIEPLKKYK RVAMVTFSVL WLILLQSEAR GALLALLVAA IVVYRFLPAS FGKAFIRPIM KAVAFGTLLW LVLIIIIPLF IFDSPIWQLR TNSSGRIDMW IYILHAIPEH IGLGYGPMSF AWAEARPLPN AHPHNALMQF LYEFGVVAFI LLASWSLITL WSILKRLKLL GAKSSEHLAK NSQCSLDTSS HIVIETDTTD IVLAFALCAI WIYAMFDGVI VMPLSQALLV ALLALNCRHY QSRVITLPLK VALVAILITC GALLIVSLGD TALNQQLYPR LWLTGIIN
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