| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0410 |
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| Symbol | |
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| ID | 4479317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 469247 |
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| End bp | 470566 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639724946 |
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| Product | ATP-dependent RNA helicase RhlB |
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| Protein accession | YP_868059 |
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| Protein GI | 117918867 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0117483 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAAA CACATTTATC TAATCAAAAA TTTGCCGACC TTCCTCTGCA TCCAGAGGTT
AAACAGGCAC TTGCCGAAAA CGGCTTTGAA TTTTGTACGC CGATTCAGGC GTTATCATTA
CCCGTATTAC TTCAATCAAA AGATATCGCC GGCCAAGCCC AAACGGGCAC GGGTAAGACA
ATGGCGTTTT TGGTTGCCAC ATTTAACCAT TTATTGTCGA CGCCTGTCCC TGAAAACCGT
CAGTTAAATC AGCCGCGCGC CATCATTATG GCTCCTACCC GTGAGCTGGC GATTCAAATC
GCCAAAGACG CGATTCTCCT TGCCAAACAC AGCCACTTAA AAGTGGGCAT TGTTTATGGC
GGTGAAAGCT ATGATGTGCA GCGCAAGACG CTCGATCAAG GTGTAGACAT TCTGATTGGT
ACCACAGGTC GGATTATCGA CTACGTGCGC CAAGGCATTA TCAATCTCGG CGGTATTCAA
GCGGTTGTGC TAGATGAAGC CGATCGCATG TTCGACCTCG GTTTTATTAA GGATATTCGT
TTCTTATTCC GACGTATGCC CAGTGCCGAT CAGCGTCTGA ATATGCTGTT TTCGGCGACA
CTTTCGATGA AGGTGCAAGA ACTCGCCTAC GATCATATGA ATGAACCTGT GAAAGTCGAA
ATAGCCCCCG AAGAAAAAAC CTCCAAGAAC ATCAAAGAAG AAATTTTCTA TCCTTCCCAA
GAAGACAAAA TGCGTTTGCT GCTGACGCTG ATTGAAGAAG ATTGGCCAGA GAAAGCCATT
GTTTTTTCAA ACACTAAGCA CAGCTGTGAA AACCTATGGT CTTGGCTTGA AGGGGATGGC
CATCGTGTCG GCCTGCTGAC GGGCGATGTG CCGCAGAAGA AGCGTATTCG CATTCTCGAG
CAATTCACTC AAGGCCAATT GGATATTCTG GTCGCGACCG ACGTTGCGGC GCGCGGACTG
CATATCTCCG ATGTTTCCCA CGTCTACAAT TATGATTTAC CTGATGATTG TGAAGATTAC
GTTCATCGTA TTGGTCGTAC TGGGCGTGCG GGTAACAAAG GTGTATCGGT CAGTTTTGCC
TGTGAAGAAT ACGCTCTGAA TTTGCCAGCG ATTGAAACCT ACATCAATCA CTCTATTCCT
GTGAGTAATT ATGACCGTGA TGCCTTGCTG GAAGATATTC CGCCGCCGGT CAAAATTCAT
CGCAGGCACC CTGCGGGAGC ACGTAATTTA CGTGAACGCT CAGGTGCAGG GCGACCACAA
GGTGCCCATC GTAGTGGTGG ACGTCCACCT CGCCATGACA GGACGCGTAG ACAGCCTTAA
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| Protein sequence | MSQTHLSNQK FADLPLHPEV KQALAENGFE FCTPIQALSL PVLLQSKDIA GQAQTGTGKT
MAFLVATFNH LLSTPVPENR QLNQPRAIIM APTRELAIQI AKDAILLAKH SHLKVGIVYG
GESYDVQRKT LDQGVDILIG TTGRIIDYVR QGIINLGGIQ AVVLDEADRM FDLGFIKDIR
FLFRRMPSAD QRLNMLFSAT LSMKVQELAY DHMNEPVKVE IAPEEKTSKN IKEEIFYPSQ
EDKMRLLLTL IEEDWPEKAI VFSNTKHSCE NLWSWLEGDG HRVGLLTGDV PQKKRIRILE
QFTQGQLDIL VATDVAARGL HISDVSHVYN YDLPDDCEDY VHRIGRTGRA GNKGVSVSFA
CEEYALNLPA IETYINHSIP VSNYDRDALL EDIPPPVKIH RRHPAGARNL RERSGAGRPQ
GAHRSGGRPP RHDRTRRQP
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