| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0408 |
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| Symbol | rho |
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| ID | 4479315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 467291 |
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| End bp | 468556 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 639724944 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_868057 |
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| Protein GI | 117918865 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.011685 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTTAA CTGAATTAAA AGACACGCCG ATATCCGACC TAGTCTCGCT AGCCGAAAAT
ATGAAACTCG AAAATATGGC CCGCGCTCGC AAGCAGGACA TTATTTTCTC TATTCTTAAA
GCCCACGCCA AAAGCGGCGA AGACATTTTC GGTGGCGGTG TATTAGAGAT ACTCCAAGAC
GGATTCGGTT TCTTACGTAG TGCAGATGGA TCTTATTTAG CTGGCCCGGA TGATATTTAT
GTATCACCAA GCCAAATTCG CCGCTTTAAC ATGCGAACGG GCGACACGAT TTTTGGCAAG
ATTCGCCCAC CAAAAGAAGG TGAACGTTAT TTTGCCCTGC TAAAAGTTAA CGAAGTTAAC
TTCGATAAAC CTGAAAACTC TCGCAACAAA ATCCTCTTTG AAAACTTAAC CCCACTCCAC
GCAGAAGAAC GTATGCGCAT GGAGCGTGGT AATGGCTCTA CTGAAGACAT CACTGCCCGT
ATTCTGGATT TATGCTCACC TATCGGTAAG GGTCAACGTG GTCTGATCGT CGCACCACCA
AAAGCGGGTA AAACCTTATT ACTGCAAAAC ATTGCTCAGT CAATCACCTA CAACAACCCA
GAAGTTGTGT TGATGGTACT GCTGATCGAT GAACGTCCTG AAGAAGTGAC CGAGATGCAA
CGCCTAGTTC AAGGTGAAGT GATTGCATCG ACCTTCGACG AACCAGCTAG CCGTCACGTA
CAAGTGGCTG AAATGGTAAT TGAAAAAGCC AAACGTTTAG TTGAGCACAA GAAAGACGTT
GTGATCTTAC TCGACTCTAT CACTCGTTTG GCTCGCGCCT ACAACACTGT TATCCCATCA
TCGGGCAAAG TGTTAACTGG TGGTGTGGAT GCAAACGCCC TGCACCGTCC TAAGCGCTTC
TTCGGCGCGG CTCGTAACAT CGAAAACGGC GGCAGCTTAA CGATTATTGC TACCGCACTG
GTTGATACCG GCTCGAAAAT GGACGAAGTG ATCTACGAAG AGTTCAAAGG TACAGGTAAC
CAAGAACTGC ATCTGTCACG CAAGGCCGCT GAAAAACGCG TATTCCCAGC GATTGACTTC
AACCGCAGTG GTACTCGTCG CGAAGAAAAA CTGACCACAC CTGATGAACT GCAAAAGATG
TGGATCCTGC GTAAGATCTT AAATCCTATG GATGAAGTCA GCGCAATGGA ATTCCTGATC
GATAAACTGG CTATGACTAA GACCAACGAA GAATTCTTCA CCGCGATGAA ACGCGCTAAG
TCTTAA
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| Protein sequence | MNLTELKDTP ISDLVSLAEN MKLENMARAR KQDIIFSILK AHAKSGEDIF GGGVLEILQD
GFGFLRSADG SYLAGPDDIY VSPSQIRRFN MRTGDTIFGK IRPPKEGERY FALLKVNEVN
FDKPENSRNK ILFENLTPLH AEERMRMERG NGSTEDITAR ILDLCSPIGK GQRGLIVAPP
KAGKTLLLQN IAQSITYNNP EVVLMVLLID ERPEEVTEMQ RLVQGEVIAS TFDEPASRHV
QVAEMVIEKA KRLVEHKKDV VILLDSITRL ARAYNTVIPS SGKVLTGGVD ANALHRPKRF
FGAARNIENG GSLTIIATAL VDTGSKMDEV IYEEFKGTGN QELHLSRKAA EKRVFPAIDF
NRSGTRREEK LTTPDELQKM WILRKILNPM DEVSAMEFLI DKLAMTKTNE EFFTAMKRAK
S
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