| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0407 |
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| Symbol | |
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| ID | 4479314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 466181 |
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| End bp | 467113 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639724943 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_868056 |
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| Protein GI | 117918864 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0109674 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCTGA ATGATCTCGC ACTATTTGTT CGCGTTGCCG ACTGCGGCAG TATTTCGGCT
GCCGCGGTCG AAATGGAACT CTCGGCAGCA TCTGCAAGCG CAGCGATTAA ACGGCTTGAA
AAACAACTTG ATACCAGCCT TTTTGTACGT ACGACCCGAA GCCTTAGATT AACCGCACAG
GGAGAGCGTT ACCTTATCCA TTGCCGCCGT GCCTTAAGTG ATCTTGCACT CGGGGAGCAG
GCGATCGCCA GCGATAAAGG TAAAGTCTCT GGTACCTTGA GCCTCTCAGT TTCATCCGAT
TTTGGGCGTA ACTTATTCGT CCCTTGGCTC GATGATTTCC TGTTAGATTT TCCGCAGCTA
CAGGTGCGAC TGCATTTGGG TGATAACATC AGCAGCTTTT ACCACGACAA AATTGATGTC
GCGGTGCGTT ACGGTAAACC GCAGGACTCC AATCAGGTCG CATTTCCGAT TTGCTGCGCC
GACCGATTAC TATGCGCTTC ACCTGAATAT CTCGCCAAGT TTGGTAAACC CGAAACCTTA
GAACAGTTAG CTCAGCACAA TTGTTTGTTT TATAAACTCG ATGACCGCAC CCATGATCAA
TGGCAATTTG AGCGTGATGG CCAGGAATTT AAAATCCGCG TGACGGGTAA TCGCAGCGCC
AATGATGCTG AAATTGCGCG CCGCTGGGCC GTGGCTGGTA AGGGTTTAGT GTTCAAGTCG
AGCTTAGATC TGGCGGAGGA TATTATGGCT GGGCGCCTTG TGCCCTTGCT GCCCGAATAT
CGGGGCGAAT CGGTCAATTT ATACTTAGTG TGCCCTGGGC GTGAGCATGT CACGCCCGTG
GTGCTGTTAC TTCGTGAAAT GCTCAGGCAA CAGACTCAAG CCTTAAGCCG TGCCCTAGCG
ACATACCTTA AGTCTGAAAC GCAGTTTAAA TAA
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| Protein sequence | MLLNDLALFV RVADCGSISA AAVEMELSAA SASAAIKRLE KQLDTSLFVR TTRSLRLTAQ
GERYLIHCRR ALSDLALGEQ AIASDKGKVS GTLSLSVSSD FGRNLFVPWL DDFLLDFPQL
QVRLHLGDNI SSFYHDKIDV AVRYGKPQDS NQVAFPICCA DRLLCASPEY LAKFGKPETL
EQLAQHNCLF YKLDDRTHDQ WQFERDGQEF KIRVTGNRSA NDAEIARRWA VAGKGLVFKS
SLDLAEDIMA GRLVPLLPEY RGESVNLYLV CPGREHVTPV VLLLREMLRQ QTQALSRALA
TYLKSETQFK
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