| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0403 |
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| Symbol | |
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| ID | 4479310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 461958 |
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| End bp | 463964 |
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| Gene Length | 2007 bp |
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| Protein Length | 668 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639724939 |
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| Product | fumarate reductase flavoprotein subunit |
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| Protein accession | YP_868052 |
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| Protein GI | 117918860 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.638219 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00648266 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAAACTGA TTTATACCGA TTCATTAGTG GTTGGTGCCG GATTGGCTGG CCTGAGGGTG
GCCATTGCCT CTAAAGAGCG CGGGTTAGAT ACCTTAGTGC TATCGCTTAT CCCCGCTAAA
CGTTCTCACT CTGCGGCGGC GCAGGGCGGA ATGCAGGCAA GCCTTGGTAA TGCAGTCAAA
GGCATGGGCG ATGATGAAGA CGTGCACTTT CAAGATACGG TGAAAGGATC GGACTGGGGC
TGCGATCAAG AAGTCGCCAG AATGTTTGCC CATTGTGCGC CTAAGGCGGT GCGTGAATTA
GCCAACTGGG GCGTGCCTTG GACACGTGTA ACCGCAGGCC CGAGGGACGT CATTGTTAAC
GCACAAAAAG TCACCTTGCA GGAAGCCGAA GAAGCCCACG GTCTGATCAA TGCCCGTGAC
TTTGGTGGCA CCAAAAAGTG GCGCACCTGC TACACCGCCG ACGGTACCGG CCACTCCTTA
CTCTATGCTA TGGATAACAA AGCGATTTCG ATGGATATTC CTGTCCACGA ACGCGTCGAA
GCGCTCTCTA TTATCCACGA CGGTCAACGT TGCCACGGGG TAATTGCCCG CTGTTTAATC
ACGGGCGAGT TGCGTGCCTA TGTCGCGAAA TCGACCACTA TCGCCACCGG TGGCTATGGC
CGCATTTATG AAGTCTCAAC CAACGCGATT ATCTGCGAGG GTATAGGTCA GGCGCTGGCG
CTCGAAACGG GCGTTGCGAC CCTTGGCAAC ATGGAAGCGG TACAGTTCCA CCCAACGGCG
ATTGTGCCCG TGGGGATTTT AACCACAGAA GGTTGCCGTG GTGATGGTGG CTTGCTGCGG
GATAAAGACG GTTACCGTTT TATGCCGGAC TATGAACCAG AGAAGAAAGA GCTGGCGTCG
CGGGACGTGG TGTCTCGCCG TATGACTGAA CATATGCGTA AAGGTAAGGG CGTCGATAGC
CCCTATGGCC CGCATTTATG GCTCGATATC ACCCTACTTG GGCGTAAGCA TATCGAAACC
AACCTGCGTG AAGTGCAGGA GATTTGCGAA AACTTCCTCG GGATTGATCC CGCGAAGGAC
TGGATCCCTG TTCGTCCAAC TCAGCACTAT TCCATGGGCG GGATCCGCAC TAAGGCAACG
GGCGAGAGTC CGCAGCTTAA GGGCTTATTC AGCGTCGGCG AAGCGGCCTG TTGGGATATG
CATGGCTTTA ACCGCTTGGG TGGTAACTCG CTCGCCGAAA CCGTGGTGGG TGGCATGATT
ATCGGCAAAT ATGTGGCTGA TTTTTGTGAG AATAATAGCC TTGAAATCGA CACTCAGCTT
GCCGAAAAAT TTATGCGACA GGTACAGACT GAAATCGACA CCTTAGTCGA TGGCGAAGGC
CATGAAAGCC CCTTCGAACT GAAGCGCGAA ATGCAGCGGA TTATGATGGA TTACGTGGGG
ATTTTCCGTA ACGGCCCTGA GCTCGATAAG GCGGTGACTG AGCTAAAGGC GCTGCTTGAA
CGCTCACGTA AGCTCGGAGT TAAGTGTAAG AAACGCCACG CTAACCCCGA GCTGGTAGAA
GCGCTAAGGG TGAAGCGGAT GCTCAAGGTG GCGCTAACTG TGGCCTGTGG CGCAGCCGCG
CGTACCGAAA GCCGTGGTGC CCACGCCCGT GAGGATTATC CGCAGCGTAA TGACAGAGAC
TGGCTCAACC GTACTCTCGC CAGTTGGCCC GATGCCGAGG CGTTGGCCCC CGTTTTAAGC
TACGAGCCGT TGGATGTGAT GAAGATGGAG CTGCCGCCGG GATACCGGGG TTATGGTATC
GATAATGCCA TCGCACACCC CGATACAGCC AAACGCGAGC AACAAATTGC CGAGATTTTG
GCTGGGCTGG GTGATGATGC CGATCGTTAT CAACGCCAAG CGGCGCTGAT GCCATTCGAG
CTGCCGCCGA GCTTACAAGC TAAAAATGAA CGTTTAAGCG ATACCTTACA AAGACCATCA
GCCAATGTGC TAGGAGAAAA ATCATAA
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| Protein sequence | MKLIYTDSLV VGAGLAGLRV AIASKERGLD TLVLSLIPAK RSHSAAAQGG MQASLGNAVK
GMGDDEDVHF QDTVKGSDWG CDQEVARMFA HCAPKAVREL ANWGVPWTRV TAGPRDVIVN
AQKVTLQEAE EAHGLINARD FGGTKKWRTC YTADGTGHSL LYAMDNKAIS MDIPVHERVE
ALSIIHDGQR CHGVIARCLI TGELRAYVAK STTIATGGYG RIYEVSTNAI ICEGIGQALA
LETGVATLGN MEAVQFHPTA IVPVGILTTE GCRGDGGLLR DKDGYRFMPD YEPEKKELAS
RDVVSRRMTE HMRKGKGVDS PYGPHLWLDI TLLGRKHIET NLREVQEICE NFLGIDPAKD
WIPVRPTQHY SMGGIRTKAT GESPQLKGLF SVGEAACWDM HGFNRLGGNS LAETVVGGMI
IGKYVADFCE NNSLEIDTQL AEKFMRQVQT EIDTLVDGEG HESPFELKRE MQRIMMDYVG
IFRNGPELDK AVTELKALLE RSRKLGVKCK KRHANPELVE ALRVKRMLKV ALTVACGAAA
RTESRGAHAR EDYPQRNDRD WLNRTLASWP DAEALAPVLS YEPLDVMKME LPPGYRGYGI
DNAIAHPDTA KREQQIAEIL AGLGDDADRY QRQAALMPFE LPPSLQAKNE RLSDTLQRPS
ANVLGEKS
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