Gene Shewana3_0401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0401 
Symbol 
ID4479308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp460293 
End bp461018 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content50% 
IMG OID639724937 
Productfumarate reductase cytochrome b-556 subunit 
Protein accessionYP_868050 
Protein GI117918858 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00794222 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACAAGCG TAACGCGCGT TCACACTAGC GTGAAAACAC AGGGGATAGG TCACCCTTGG 
TCGGCCAAGG CCGATAGATT ACAGAGCGCG ACTGGTATTA TGCTGGGCTG CTTTCTGTTG
TTACATATGC ATTTCGAGTC GAGCATTCTG CTGGGTAAAG AGGCCTTTTA CCATGTGGTG
CAGTTGCTCG AAGGCGGTAT GTTTAGCAGT ACGGGCCATG GCTTTCCGAT TGTCACTAAA
GTCTTCTCAG TGTTTATGCT GCTCGTGGTG ATTCTACATG CAGCCGTTGC TCTTAGACGG
TTTCCGGCGC AGCTTGGGCA GTGGCGAGCG TTGCGATCAC ATTTAGGTGG CATTAAACAT
CGCGATACCC ATGCTTGGTT TTGGCAGTTG ATCACGGGTT TTATTCTGTT TTTCCTGGTG
CCAGTGCACC TCTTTACCAT GATCTTAAAT CCTGAAATTG GTCCACATTT ATCGGCCGAG
CGTGTCTATC ACGATAATGC TTGGTTGCTC TACGCCCTGT TGCTGCCCGC GGTCGTCATC
CACGCCATGA TTGGTTTATA CCGAGTGGCG GTTAAGTGGG GCATCACGAC CCAGCGCTCC
GGCTTACGTA AGCTTGCTAA GGTATTGATT ATCTATTTGT TATGCCTAGG TGGTGCGAGC
TTAGTCTCCT ATATGTTTAT CGGTAGTGAG CTAAGTGTGC CGGTGCAGCC TTATGTGCCC
CATTGA
 
Protein sequence
MTSVTRVHTS VKTQGIGHPW SAKADRLQSA TGIMLGCFLL LHMHFESSIL LGKEAFYHVV 
QLLEGGMFSS TGHGFPIVTK VFSVFMLLVV ILHAAVALRR FPAQLGQWRA LRSHLGGIKH
RDTHAWFWQL ITGFILFFLV PVHLFTMILN PEIGPHLSAE RVYHDNAWLL YALLLPAVVI
HAMIGLYRVA VKWGITTQRS GLRKLAKVLI IYLLCLGGAS LVSYMFIGSE LSVPVQPYVP
H