Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0401 |
Symbol | |
ID | 4479308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 460293 |
End bp | 461018 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639724937 |
Product | fumarate reductase cytochrome b-556 subunit |
Protein accession | YP_868050 |
Protein GI | 117918858 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00794222 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACAAGCG TAACGCGCGT TCACACTAGC GTGAAAACAC AGGGGATAGG TCACCCTTGG TCGGCCAAGG CCGATAGATT ACAGAGCGCG ACTGGTATTA TGCTGGGCTG CTTTCTGTTG TTACATATGC ATTTCGAGTC GAGCATTCTG CTGGGTAAAG AGGCCTTTTA CCATGTGGTG CAGTTGCTCG AAGGCGGTAT GTTTAGCAGT ACGGGCCATG GCTTTCCGAT TGTCACTAAA GTCTTCTCAG TGTTTATGCT GCTCGTGGTG ATTCTACATG CAGCCGTTGC TCTTAGACGG TTTCCGGCGC AGCTTGGGCA GTGGCGAGCG TTGCGATCAC ATTTAGGTGG CATTAAACAT CGCGATACCC ATGCTTGGTT TTGGCAGTTG ATCACGGGTT TTATTCTGTT TTTCCTGGTG CCAGTGCACC TCTTTACCAT GATCTTAAAT CCTGAAATTG GTCCACATTT ATCGGCCGAG CGTGTCTATC ACGATAATGC TTGGTTGCTC TACGCCCTGT TGCTGCCCGC GGTCGTCATC CACGCCATGA TTGGTTTATA CCGAGTGGCG GTTAAGTGGG GCATCACGAC CCAGCGCTCC GGCTTACGTA AGCTTGCTAA GGTATTGATT ATCTATTTGT TATGCCTAGG TGGTGCGAGC TTAGTCTCCT ATATGTTTAT CGGTAGTGAG CTAAGTGTGC CGGTGCAGCC TTATGTGCCC CATTGA
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Protein sequence | MTSVTRVHTS VKTQGIGHPW SAKADRLQSA TGIMLGCFLL LHMHFESSIL LGKEAFYHVV QLLEGGMFSS TGHGFPIVTK VFSVFMLLVV ILHAAVALRR FPAQLGQWRA LRSHLGGIKH RDTHAWFWQL ITGFILFFLV PVHLFTMILN PEIGPHLSAE RVYHDNAWLL YALLLPAVVI HAMIGLYRVA VKWGITTQRS GLRKLAKVLI IYLLCLGGAS LVSYMFIGSE LSVPVQPYVP H
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