Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0397 |
Symbol | |
ID | 4479304 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 456503 |
End bp | 457249 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639724933 |
Product | hemerythrin HHE cation binding domain-containing protein |
Protein accession | YP_868046 |
Protein GI | 117918854 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG2846] Regulator of cell morphogenesis and NO signaling |
TIGRFAM ID | [TIGR03652] iron-sulfur cluster repair di-iron protein |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000185602 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.300688 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTATCTG CCCATCTCTC ATCCGAAAAC CCAGTTGAAG CACAGTCAGC CTCAATCACC CCATGGCTTG AACGCAAAGT GGGGGAATTG GTCGCAGAGG ATTTTCGCCG CGCCCACGTG TTTAGCCAAT TTGGTATCGA TTTCTGCTGC GGGGGTGGTC GAGCACTCGT TAATGCCTGC GAGCGAGCAG AGGCCAATCC TGAGCAAGTC GTCGCCGCAC TGGAGGCCGT TTCCCACTCG GGAGCCAAAG AAGATGAACT CAATCAATTG CCACTCGACC AGTTGATCGA TTACATCGAG CGCACCCATC ATCAATATGT TCGCGCTAAG GCGCCGTTAT TGCTCGAATA TTCAGAGAAA ATGGTACGCG CCCATGGTGA GCATTATGCG GAGATCATTC CCTTCGCTGG CTGGGTGCGC GCCTTAATTG AAGACTTAAT GCCGCATTTG ATGAAGGAAG AAAATATCCT CTTCCCCGCG ATCCGCGCCA TGAGCCGAGG TGAGCAAGTG CAAGGTTGTT TTGGGCACAT AGGCAACCCC ATCAATGCGA TGCAATACGA GCACGAAGAA GCTGGGCAAA TTTTGCAAAA GCTACACGAG TTAACCAATG ATTTTACGCC GCCGGAATAC GCCTGCACCA CATGGCGCGT TTGTTACGCG ACTCTGGTCG AATTTGAGGC AGACTTGCAC CGACACATCC ATTTAGAGAA CAACATTCTC TTCCCTAAGG CGCTACAACT CGCCTAG
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Protein sequence | MLSAHLSSEN PVEAQSASIT PWLERKVGEL VAEDFRRAHV FSQFGIDFCC GGGRALVNAC ERAEANPEQV VAALEAVSHS GAKEDELNQL PLDQLIDYIE RTHHQYVRAK APLLLEYSEK MVRAHGEHYA EIIPFAGWVR ALIEDLMPHL MKEENILFPA IRAMSRGEQV QGCFGHIGNP INAMQYEHEE AGQILQKLHE LTNDFTPPEY ACTTWRVCYA TLVEFEADLH RHIHLENNIL FPKALQLA
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