Gene Shewana3_0397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0397 
Symbol 
ID4479304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp456503 
End bp457249 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content52% 
IMG OID639724933 
Producthemerythrin HHE cation binding domain-containing protein 
Protein accessionYP_868046 
Protein GI117918854 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG2846] Regulator of cell morphogenesis and NO signaling 
TIGRFAM ID[TIGR03652] iron-sulfur cluster repair di-iron protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000185602 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.300688 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTATCTG CCCATCTCTC ATCCGAAAAC CCAGTTGAAG CACAGTCAGC CTCAATCACC 
CCATGGCTTG AACGCAAAGT GGGGGAATTG GTCGCAGAGG ATTTTCGCCG CGCCCACGTG
TTTAGCCAAT TTGGTATCGA TTTCTGCTGC GGGGGTGGTC GAGCACTCGT TAATGCCTGC
GAGCGAGCAG AGGCCAATCC TGAGCAAGTC GTCGCCGCAC TGGAGGCCGT TTCCCACTCG
GGAGCCAAAG AAGATGAACT CAATCAATTG CCACTCGACC AGTTGATCGA TTACATCGAG
CGCACCCATC ATCAATATGT TCGCGCTAAG GCGCCGTTAT TGCTCGAATA TTCAGAGAAA
ATGGTACGCG CCCATGGTGA GCATTATGCG GAGATCATTC CCTTCGCTGG CTGGGTGCGC
GCCTTAATTG AAGACTTAAT GCCGCATTTG ATGAAGGAAG AAAATATCCT CTTCCCCGCG
ATCCGCGCCA TGAGCCGAGG TGAGCAAGTG CAAGGTTGTT TTGGGCACAT AGGCAACCCC
ATCAATGCGA TGCAATACGA GCACGAAGAA GCTGGGCAAA TTTTGCAAAA GCTACACGAG
TTAACCAATG ATTTTACGCC GCCGGAATAC GCCTGCACCA CATGGCGCGT TTGTTACGCG
ACTCTGGTCG AATTTGAGGC AGACTTGCAC CGACACATCC ATTTAGAGAA CAACATTCTC
TTCCCTAAGG CGCTACAACT CGCCTAG
 
Protein sequence
MLSAHLSSEN PVEAQSASIT PWLERKVGEL VAEDFRRAHV FSQFGIDFCC GGGRALVNAC 
ERAEANPEQV VAALEAVSHS GAKEDELNQL PLDQLIDYIE RTHHQYVRAK APLLLEYSEK
MVRAHGEHYA EIIPFAGWVR ALIEDLMPHL MKEENILFPA IRAMSRGEQV QGCFGHIGNP
INAMQYEHEE AGQILQKLHE LTNDFTPPEY ACTTWRVCYA TLVEFEADLH RHIHLENNIL
FPKALQLA