| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0394 |
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| Symbol | |
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| ID | 4478976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 454447 |
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| End bp | 455169 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639724930 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_868043 |
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| Protein GI | 117918851 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.742818 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.409848 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTGTT ATCTTAGACC CCAGAATATT CGTGCGATCA GCTTCGATCT TGACGATACC
TTATACGATA ACGAGCCTCA TATTCTGAAT GCCGAAGCCG AGCTAACGCA GTTTTTGCAT
CAGGCTTTTC CGCTGACTCA AGCTTGGCAA CCGCAGCAAT GGCGACTGCT CAAGTTACAG
TTGCTACAGC AAAATCCTGC CTTAGCCCAT GATACCTCGG CGGCGCGAAT TGCGACTCTG
CATAAAGGTC TTTCGCTGCT CGGTTATAGC GAGTCGGAGG CAAAACGGGG TGCGCAGGAA
GGGTTGGATT GTTTCTATTT CCATCGCAGC CATTTTCAGG TTTCAGACGA AGTCTTGGCG
CTGCTCGCGC GCTTATCGGC CCATTTTCGG TTGATTGGTA TCACCAATGG CAATGTGGAC
GCACAGCGCA TTGGCTTGAG TGAGGTGTTC GAATTTGTGC TGCATCCTGG TAGTGGTGTA
CGGATGAAAC CCGCTAAAGA TATGTTTTCA CAGGCTTGTG AAAGGCTGGA TATCGGCTTA
GACGAACTGC TGCACGTGGG TGATAGTATG AATGCCGATG TTCGCGGTGC GCGCTTAGCG
GGCTGCCAGT CGGTCTGGCT CAACCCGAGT TTTGGCCGCG TGGCGTCGCT GCCGATAGCA
GCCCTATTAC CCCATATGGA AATTGCGACC CTCGATGCTC TGCTGGAGAT GTTACTGCCA
TAA
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| Protein sequence | MRCYLRPQNI RAISFDLDDT LYDNEPHILN AEAELTQFLH QAFPLTQAWQ PQQWRLLKLQ
LLQQNPALAH DTSAARIATL HKGLSLLGYS ESEAKRGAQE GLDCFYFHRS HFQVSDEVLA
LLARLSAHFR LIGITNGNVD AQRIGLSEVF EFVLHPGSGV RMKPAKDMFS QACERLDIGL
DELLHVGDSM NADVRGARLA GCQSVWLNPS FGRVASLPIA ALLPHMEIAT LDALLEMLLP
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