| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0393 |
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| Symbol | |
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| ID | 4478975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 453548 |
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| End bp | 454447 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639724929 |
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| Product | tyrosine recombinase XerC |
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| Protein accession | YP_868042 |
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| Protein GI | 117918850 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4973] Site-specific recombinase XerC |
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| TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.426652 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCGC AGTGTCAGTC CTATTTGCAG CAGTTTGAAA CCTATATGCA GTCAGAGCGC
CAGTTATCGG CGCATACGGT TCGCAATTAT ATGTACGAGT TGCAGCGGGG AAGCGAGTTA
TTGCCCGAGG GTGTTGATTT GCTCAATGTG GGCCGTGAGC ATTGGCAACA AGTGCTTGCT
AAGCTGCATC GCAAGGGCTT GAGCCCACGC TCGCTATCAT TGTGGTTGTC GGCCATCAAA
CAGTGGGGAG AGTTTTTATT GCGCTCAGGC GTGATTGAAC TTAATCCTGC CAAGGGGCTG
AGCGCGCCCA AACAAGCCAA ACCGTTACCT AAGAATATCG ACGTCGATTC TATCTCGCAT
CTGCTCGCGA TTGAGGGTAA TGATCCGCTG ACCCTGCGTG ATAAAGCCAT TATGGAGCTG
TTCTACTCCA GCGGATTGCG CTTGGCTGAA CTGGCGGCGC TGGACTTATC CAGTGTGCAA
TACGATCAGC ATGAAGTGCG CGTTTTGGGC AAAGGCAACA AAGAGCGCAT AGTCCCCGTT
GGGCGTTACG CCATAGAGGC CATCAGTGCT TGGCTTAAGT GCCGCAAACA AATTTCCTGT
GAAGATAATG CATTGTTTGT CACGGAGAAG GGCAAGCGTT TGTCCCATCG CAGTATTCAG
GCGCGCATGA GCAAATGGGG TCAGGAGCAG GCGCTTTCTA TGCGGGTGCA TCCCCATAAG
TTACGCCATT CCTTTGCGAC GCACATGCTG GAATCCAGTG CCGATTTGCG GGCGGTGCAG
GAATTATTAG GTCACGAAAA CCTGTCGACC ACGCAAATTT ATACCAGTTT AGATTTCCAA
CACTTAGCTA AGGTGTATGA TAACGCCCAT CCTAGAGCGA AAAAACAACA GGATAAATAA
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| Protein sequence | MTPQCQSYLQ QFETYMQSER QLSAHTVRNY MYELQRGSEL LPEGVDLLNV GREHWQQVLA
KLHRKGLSPR SLSLWLSAIK QWGEFLLRSG VIELNPAKGL SAPKQAKPLP KNIDVDSISH
LLAIEGNDPL TLRDKAIMEL FYSSGLRLAE LAALDLSSVQ YDQHEVRVLG KGNKERIVPV
GRYAIEAISA WLKCRKQISC EDNALFVTEK GKRLSHRSIQ ARMSKWGQEQ ALSMRVHPHK
LRHSFATHML ESSADLRAVQ ELLGHENLST TQIYTSLDFQ HLAKVYDNAH PRAKKQQDK
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