| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0390 |
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| Symbol | |
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| ID | 4478972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 450725 |
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| End bp | 451969 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639724926 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_868039 |
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| Protein GI | 117918847 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGATCACT TTCTCTACCA AGACAATACC CTGTACGCCG AAGGCTGTCG GGTCAATGAT
TTAGCCCAGC AGTATGGCAC GCCACTGTAT ATCTATTCCC GTGCGACGCT CGAACGTCAC
TGGCATGCGT TTAACAATGC GGTGGCCGAC CATCCACATT TAGTGTGTTA CGCGGTGAAA
GCCAACTCAA ACTTAGCCGT ACTGAACGTC TTGGCTCGTT TAGGCAGTGG TTTTGATATT
GTCTCGGGCG GTGAGTTAGC ACGGGTGATT GAAGCCGGTG GCGATCCTGC CAAAGTGGTG
TTTTCGGGCG TGGGTAAAAC CGTTGCCGAA ATGGAACAGG CACTTAACCT CGGTATTTAT
TGCTTTAACG TCGAATCGAG CGCCGAGCTT GAACAACTTA ATGACGTTGC AGGCCGCTTA
GGTAAAGTTG CCCCAGTGTC ACTGCGGGTG AATCCCGATG TCGATGCCGG TACGCATCCT
TATATCTCGA CGGGCCTTAA AGAGAACAAA TTTGGTATCG CCATGGATGA GGCCGAAGTC
GTATTCGCCC GTGCCCATGC GCTGCCACAT TTACAGGTAA AAGGGGTAGA TTGCCATATT
GGTTCACAGC TGACCGAGAT CCAGCCTTTC CTCGATGCGA TGGACAGAAT GTTAGCCCTT
ATCGACCGTC TGGCCGATCA AGGCATTGTG ATTGAACACT TCGATGTGGG TGGCGGTTTA
GGGGTGACCT ATGATGATGA AACCCCGCCG CATCCCGATG TTTACGCTGC TGCACTGCTC
GCGCGTTTAG GTGATCGCAA GCTCAAGTTA ATTTTCGAGC CGGGTCGTGC CATCGCCGCT
AACGCGGGGA TTTTCGTCAC TCAGGTGCTG TACCTTAAAG AAAACAGCGA TAAACGTTTT
GCGATTGTCG ACGGCGCGAT GAACGACTTA ATTCGTCCTG CACTCTATAG CGCTTGGCAA
AATATCATTC CGGTAAATCC AAGGGATGAA CAAGCGCAAG TATTTGATAT CGTAGGGCCA
GTGTGCGAAA CCGGTGACTT TTTAGGTAAA GACAGAGCAC TCGCGATTGC GGCGGGGGAT
TTACTGGTTG TGCGCTCGAG CGGTGCCTAC GGTTTTGCCA TGGCTTCTAA CTATAACACT
CGTCCGCGTG CGGCCGAGGT GATGGTCGAT GGTGACAAGG CTTATCTGGT GCGTGAGCGA
GAAAAATTAG CGCAGCTCTG GCAAGGTGAG CAACTCCTGC CGTAA
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| Protein sequence | MDHFLYQDNT LYAEGCRVND LAQQYGTPLY IYSRATLERH WHAFNNAVAD HPHLVCYAVK
ANSNLAVLNV LARLGSGFDI VSGGELARVI EAGGDPAKVV FSGVGKTVAE MEQALNLGIY
CFNVESSAEL EQLNDVAGRL GKVAPVSLRV NPDVDAGTHP YISTGLKENK FGIAMDEAEV
VFARAHALPH LQVKGVDCHI GSQLTEIQPF LDAMDRMLAL IDRLADQGIV IEHFDVGGGL
GVTYDDETPP HPDVYAAALL ARLGDRKLKL IFEPGRAIAA NAGIFVTQVL YLKENSDKRF
AIVDGAMNDL IRPALYSAWQ NIIPVNPRDE QAQVFDIVGP VCETGDFLGK DRALAIAAGD
LLVVRSSGAY GFAMASNYNT RPRAAEVMVD GDKAYLVRER EKLAQLWQGE QLLP
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