Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0373 |
Symbol | |
ID | 4478951 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 410678 |
End bp | 411244 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 639724905 |
Product | TetR family transcriptional regulator |
Protein accession | YP_868022 |
Protein GI | 117918830 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAGTA AACGCGACTT AATACTCCGC TCCGCCGAAA AAATTATTGC GACAGAGGGA TTACATAATC TTTCAATGCA AAAGCTTGCC GCAGATGCAG GAGTCGCTGC AGGTACGATT TATCGCTACT TTAAAGACAA AGAAGATTTG ATCATTGAAC TGCGTAAAGA CGTATTACAA CAAATTGCCA GCAAGTTGCT TGAAAACATT AATGAAGGTA GCTTTGACCA AAAATTTCGC CGCCTATGGT TCAACATTGT GGCACTGGGG CGTAAGCAAT CCCATGCAAA TTTAAGCTTT GCACAGTATT CCCACCTTCC AGGTGTCGAT GCGCCTGAGC ATCAAGCCTT TGAAAGGGAG ATTTTCCAGC AGTTACATCA ACTATTTGAG CAGGCGAAAG ATCAAGGCGT CATCCAACCA TTGAATAATG CCTTGTTATT TTCTATCGCC TTTGAGCCGG CTGTTGCGAT AGGTAAACGC CTTCGCCGCG GCCATTTGCA ATGTACAGAT ACAGAGATCC AGCAGGCATG TGAGCTTTGC CTTCAGGCAA TTTCTGTGAC GAATTAA
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Protein sequence | MDSKRDLILR SAEKIIATEG LHNLSMQKLA ADAGVAAGTI YRYFKDKEDL IIELRKDVLQ QIASKLLENI NEGSFDQKFR RLWFNIVALG RKQSHANLSF AQYSHLPGVD APEHQAFERE IFQQLHQLFE QAKDQGVIQP LNNALLFSIA FEPAVAIGKR LRRGHLQCTD TEIQQACELC LQAISVTN
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