Gene Shewana3_0373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0373 
Symbol 
ID4478951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp410678 
End bp411244 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content44% 
IMG OID639724905 
ProductTetR family transcriptional regulator 
Protein accessionYP_868022 
Protein GI117918830 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAGTA AACGCGACTT AATACTCCGC TCCGCCGAAA AAATTATTGC GACAGAGGGA 
TTACATAATC TTTCAATGCA AAAGCTTGCC GCAGATGCAG GAGTCGCTGC AGGTACGATT
TATCGCTACT TTAAAGACAA AGAAGATTTG ATCATTGAAC TGCGTAAAGA CGTATTACAA
CAAATTGCCA GCAAGTTGCT TGAAAACATT AATGAAGGTA GCTTTGACCA AAAATTTCGC
CGCCTATGGT TCAACATTGT GGCACTGGGG CGTAAGCAAT CCCATGCAAA TTTAAGCTTT
GCACAGTATT CCCACCTTCC AGGTGTCGAT GCGCCTGAGC ATCAAGCCTT TGAAAGGGAG
ATTTTCCAGC AGTTACATCA ACTATTTGAG CAGGCGAAAG ATCAAGGCGT CATCCAACCA
TTGAATAATG CCTTGTTATT TTCTATCGCC TTTGAGCCGG CTGTTGCGAT AGGTAAACGC
CTTCGCCGCG GCCATTTGCA ATGTACAGAT ACAGAGATCC AGCAGGCATG TGAGCTTTGC
CTTCAGGCAA TTTCTGTGAC GAATTAA
 
Protein sequence
MDSKRDLILR SAEKIIATEG LHNLSMQKLA ADAGVAAGTI YRYFKDKEDL IIELRKDVLQ 
QIASKLLENI NEGSFDQKFR RLWFNIVALG RKQSHANLSF AQYSHLPGVD APEHQAFERE
IFQQLHQLFE QAKDQGVIQP LNNALLFSIA FEPAVAIGKR LRRGHLQCTD TEIQQACELC
LQAISVTN