| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0359 |
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| Symbol | |
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| ID | 4479095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 396057 |
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| End bp | 397700 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639724891 |
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| Product | threonine dehydratase |
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| Protein accession | YP_868008 |
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| Protein GI | 117918816 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form
[TIGR01127] threonine dehydratase, medium form |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTATCTC TCGCATCGTC GCAAACGGAG CAGGCTGAGG CGCAGGCCTC TCAGTCGAAG
CCGGGCACTT CTGCCTTAGA AAAGAGTCAG CTTGCGCAAA GCTACCTGCA AAAAATCCTG
CTGTCGTCGG TTTATGACGT TGCGAAAGTG ACGCCACTCT CGAGCCTGAA TAAACTTTCG
GCGCGTTTGG GCTGCCAAGT ATTTTTAAAG CGTGAGGATA TGCAGCCAGT GCATTCCTTC
AAGTTGCGCG GCGCCTATAA CCGTATCGCC CAGTTAAGCC AAGCCGAATG TCAACGCGGC
GTAGTGTGCG CCTCGGCGGG TAACCATGCT CAAGGCGTGG CCATGTCGGC GGCCAGTCGT
GGTGTGGATG CTGTGATTGT GATGCCCGAA ACTACGCCGG ATATCAAAGT CGATGCTGTG
CGCCGCTTGG GCGGCAACGT AGTGTTGCAC GGCCAAGCCT TCGATCAGGC CAATGGCTTT
GCGATGGAGA TGGCAAAGCT GGAGGGTCGG GTGTATATCG CCCCCTTCGA TGACGAAGCC
GTTATCGCAG GCCAAGGCAC TATCGCCCAA GAAATGCTGC AACAGCAGCG CGACCTTGAA
GTGGTATTTG TGCCCGTGGG CGGCGGTGGC TTAATTGCTG GGATTGCGGC CTATTACAAG
GCGGTGATGC CACAGGTCAA AATTGTTGGG GTGGAGCCTG AAGATGCGGC TTGCTTAAAA
GCGGCGATGG AGGCGGGCGA GCCTGTCACA CTTGCGCAAG TTGGCTTGTT TGCCGATGGG
GTCGCGGTTA AACGTATCGG CACAGAGCCA TTTCGCTTAG CTAAGTGGTT TGTGGATGAA
GTGGTGACGG TAACGTCCGA CGAAATCTGC GCTGCTGTAA AAGATATTTT TGAGGATACC
CGCGCCATTG CCGAACCTGC TGGCGCCTTA TCCCTTGCGG GGCTTAAAAA ATACGTCAGC
ACCAATGCCG CAGGCGAGAG TGGCAAGGGG GAAAAAGTCG CGGCGATATT AAGTGGCGCG
AATGTGAACT TCCATAGCCT ACGTTATGTA TCGGAGCGCT GCGAGTTGGG TGAGCAAAAA
GAAGCCGTGC TGGCGGTTAA AGTGCCCGAG CGTCCCGGCA GCTTCCTGCG TTTTTGTGAG
TTGCTCGAAA AGCGGGTGAT GACCGAATTT AACTATCGCT TTAGTAGCCG CGATATGGCG
GTGGTGTTTG CGGGTATTCG TCTGACCAAA GGCCATGGCG AATTAGAGCA GATCATCAAT
ACCTTAGAAG ATAATGGCTT CGAGGTGCAG GACTTATCCG GTGACGAAAC CGCGAAATTG
CATGTGCGTT ATATGGTCGG TGGTCATCCG CCAGAGCCGT TAGAGGAGCG CCTATTTAGC
TTCGAGTTTC CCGAGCATCC GGGGGCGCTG CTGAAGTTTT TAACTACCCT GCAGAGCAAG
TGGAATATCA GTTTATTCCA TTACCGTAAT CACGGCGCGG CCTTTGGGCG AGTGCTGGCG
GGGTTCGAAG TTCCCGAGGG CGATGCCTTG CCGTTTCAGC AGTTTTTAAC TGAGCTGGGA
TTTGTCTATC AAGAAGAGAC GCAAAGCCCT GCTTATCAAC TATTTTTGAA TGCTGGAAAA
GGAAAAAAGA GCCTGCCTTT GTAA
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| Protein sequence | MLSLASSQTE QAEAQASQSK PGTSALEKSQ LAQSYLQKIL LSSVYDVAKV TPLSSLNKLS
ARLGCQVFLK REDMQPVHSF KLRGAYNRIA QLSQAECQRG VVCASAGNHA QGVAMSAASR
GVDAVIVMPE TTPDIKVDAV RRLGGNVVLH GQAFDQANGF AMEMAKLEGR VYIAPFDDEA
VIAGQGTIAQ EMLQQQRDLE VVFVPVGGGG LIAGIAAYYK AVMPQVKIVG VEPEDAACLK
AAMEAGEPVT LAQVGLFADG VAVKRIGTEP FRLAKWFVDE VVTVTSDEIC AAVKDIFEDT
RAIAEPAGAL SLAGLKKYVS TNAAGESGKG EKVAAILSGA NVNFHSLRYV SERCELGEQK
EAVLAVKVPE RPGSFLRFCE LLEKRVMTEF NYRFSSRDMA VVFAGIRLTK GHGELEQIIN
TLEDNGFEVQ DLSGDETAKL HVRYMVGGHP PEPLEERLFS FEFPEHPGAL LKFLTTLQSK
WNISLFHYRN HGAAFGRVLA GFEVPEGDAL PFQQFLTELG FVYQEETQSP AYQLFLNAGK
GKKSLPL
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