| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0352 |
|---|
| Symbol | |
|---|
| ID | 4479088 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 386660 |
|---|
| End bp | 387499 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 639724884 |
|---|
| Product | amino acid ABC transporter periplasmic protein |
|---|
| Protein accession | YP_868001 |
|---|
| Protein GI | 117918809 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCGTT TATTATATCC GCTAATCGCC TTGTTATGCG TGATTCTGCT CTCGCCTGCT
GCCCATGGCG CAGACGAGCT TTCCCCATTA AGGTTACGCT TTTGTGTCGA AGAGACTGAA
TATCCACCGT TTAATTATTT TATTCGGCAA GATGGCATTA AGACTTCCAC GCTTAGCGGC
TACGATATCG ACCTGCTAGA ACGCACCTTT AAACCCATTG GAATTGATTA TGAAGTGCAG
GCTTTGCCTT GGTTACGCTG TTTGAAGGAC GTTCAAAATG GCAGCATAGA TGCCGCAATG
AGCGCATCGC TCAACCGACA AAGGGCGACT GATTATATCC CATCTATTGC TTATTATTAC
CTCACCCCCA GTTATTTTTA TTTGAAAGCA GAACTAGACC CGCAATTTCA TATAAATGAT
ATCAATCAGT TGGCTGATTT TGGCACGGTT TGCGGCATTA AAGGCTTCAA TTACGACAAC
TTTGGCTGGC ATCACGACAC GCCAATTAGC GAGATAAATT CTCTACATCA TCTACCGGAA
ATGCTGCTGA AACACAGGTG TAAATTCTTT ATCGCCCGTA AGGAGATTTT GGCAGGCACA
CTCGCCTTAG CGCAGGCTGG CGAACTGCCG AAGACACTCA CCTCACAACC GTCGCCGAAT
ACTCAACAGG AGCCCTTTTA TATGCTTATC TCTAAGCGTT CGGCTCATAA AGACTTGATT
GCTCGTGAGT TTAATCGGCA GGTCAAGGCG ATGCGTGATA ACCACCAACT CGAAACCCTC
TACCAATACC ATATTCAAAA GCTTACTCAC GGGGGCGATA AGGGCAGTAA TTCGCCTTAG
|
|---|
| Protein sequence | MMRLLYPLIA LLCVILLSPA AHGADELSPL RLRFCVEETE YPPFNYFIRQ DGIKTSTLSG
YDIDLLERTF KPIGIDYEVQ ALPWLRCLKD VQNGSIDAAM SASLNRQRAT DYIPSIAYYY
LTPSYFYLKA ELDPQFHIND INQLADFGTV CGIKGFNYDN FGWHHDTPIS EINSLHHLPE
MLLKHRCKFF IARKEILAGT LALAQAGELP KTLTSQPSPN TQQEPFYMLI SKRSAHKDLI
AREFNRQVKA MRDNHQLETL YQYHIQKLTH GGDKGSNSP
|
|---|
| |