Gene Shewana3_0336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0336 
Symbol 
ID4479072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp371833 
End bp373653 
Gene Length1821 bp 
Protein Length606 aa 
Translation table11 
GC content54% 
IMG OID639724868 
Productglycosyl transferase family protein 
Protein accessionYP_867985 
Protein GI117918793 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis
[COG4261] Predicted acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACA CAATGCTAGT CCCGCCGAGT GATTTAATGG GCACGGCACC AATCAAGCTG 
GCACTGGTGA TCCCCAATTA TAATCATAGC GCCGCGATCG CCCAGACCTT GGCCGAGCTA
TCCGCCCTCA ATCTGCCCTG CTATTTGATA GACGATGGCA GCAACGATGA GACCCGCTAT
CTGCTGCAAT CCTTGGCGGA GCAACACGAC TGGGTGACCC TGCTGCAACA CCCCTACAAC
CGTGGTAAGG GTGCGGCTGT GATGACGGGG CTTCGCCGTG CGTATCGCGA TGGCTTTACC
CATGCGCTAC AGATCGATGC CGATGGCCAG CATAATTTGA GCGATATCCC CGCCATGCTC
ACCAAGGCTC AGGCCAAGCC GGATGCGCTG ATCTCGGGCA AGCCAGAGTA CGACGAGTCC
GTCCCCAAGG GGCGACTTTA TGGGCGTTAC CTCACCCACT TTTGGGTATG GGTCGAAACC
TTAAGCTTTG ATATTCAAGA TTCTATGTGC GGATTTAGGG TGTATCCCTT AGCCGCCACC
GAGCGTCTCT TAAGCCAGCA CGCCCTCACA GAGCGGATGG ATTTTGATAT CGAAATCCTA
GTCAAACTCT ACTGGCAAGG GGTGGAAATT CTGTTTCACC CCACTAAGGT CATTTATCCC
GAAAACGGCG TCAGCCACTT CCAAGGTGTG GCCGACAATG TGCGCATCAC TAAGCTGCAC
ACCCGGTTAT TTTTTGGCAT GTTAAAGCGC CTGCCACAAC TGCTGCGCCG TAAACAGAAA
GCGCAATCGC TCCAGCCCGA TAAAGCATCA ACCCATTGGT CAGGGATGAA GGAGCGCGGT
AGTTATTGGG GCATAAAACT GTTAGTCGAA AGCTACCGAT TCGGCGGCCA TTGGTTGTGC
CGCGCCATTA TGTATCCGGT AATTTGCTAT TTCTTCCTGA CGGGCAAAGT CAGCCGCGAG
GCCTCGTTGG ATTTTCTGCG CCGCGTGCAA CGCCTCGAGC CGCAACATCC GCAATTGAAT
CGCCCCATTG GCTGGCGCGA TAGCCTGAAC CACTTTCTCG CCTTTGGTAA TGCGGCGCTC
GATAGAATCG ATGCCTGGTG CGACCGTATT CAATTAAGCC AAGTGGATTT TCCCGACCGC
CAGGTGCTAG CCGATCAGCT AGAAAGTGGC AAAGGTGCCG TGCTGCTGGT CTCCCACTTG
GGTAATCTCG AACTGTGCCG CGCGATTTCA ATCCACCAGC GCAAGGTCAA AGTGAATGTC
ATGGTGTTAA CCAGCCATGC CGAAAACTTT AATAATGTCC TCAAGCAATT AAACCCCGAT
AGCACGCTGA ATTTGATCCA AGTAACCGAG CTTAATCCCG CCACCTCTAT GCTGCTACAG
CAAAAGATTG AAGACGGTGA GCTAGTAGTA ATTGCTGGCG ATAGAACCTC ATCCCACTCC
CAAGGACGCG TGGTATATGC GCCATTTATG GGTGAAGAGG CAGCCTTCCC GCAGGGGCCA
TTTATTCTAG CCGGCCTCTT GGATTGCCCT GTGTATCTGA TGTTTTGCCT GCGCGAACAA
GGGCGATATC GCGTGCATTT GGAGCACTTT AGCAACAGCC TCAAGGGCCC GCGTGCAGGG
CGAATGGAAC GACTACAACA GGCGGTGCAT AACTACAGCG AGCGCCTCGA ACACTATGCA
AGGCGTGAGC CCTTGCAATG GTTTAACTTT TTTGATTTTT GGCGGGACGA TAGCAAGGTT
AACCGCGCGA CATCCGCCCC ACAAACGACA GCAGCACTCC CGGAGCTGGA GCGCACTACA
GACAGGACAG AGCATTTATG A
 
Protein sequence
MSDTMLVPPS DLMGTAPIKL ALVIPNYNHS AAIAQTLAEL SALNLPCYLI DDGSNDETRY 
LLQSLAEQHD WVTLLQHPYN RGKGAAVMTG LRRAYRDGFT HALQIDADGQ HNLSDIPAML
TKAQAKPDAL ISGKPEYDES VPKGRLYGRY LTHFWVWVET LSFDIQDSMC GFRVYPLAAT
ERLLSQHALT ERMDFDIEIL VKLYWQGVEI LFHPTKVIYP ENGVSHFQGV ADNVRITKLH
TRLFFGMLKR LPQLLRRKQK AQSLQPDKAS THWSGMKERG SYWGIKLLVE SYRFGGHWLC
RAIMYPVICY FFLTGKVSRE ASLDFLRRVQ RLEPQHPQLN RPIGWRDSLN HFLAFGNAAL
DRIDAWCDRI QLSQVDFPDR QVLADQLESG KGAVLLVSHL GNLELCRAIS IHQRKVKVNV
MVLTSHAENF NNVLKQLNPD STLNLIQVTE LNPATSMLLQ QKIEDGELVV IAGDRTSSHS
QGRVVYAPFM GEEAAFPQGP FILAGLLDCP VYLMFCLREQ GRYRVHLEHF SNSLKGPRAG
RMERLQQAVH NYSERLEHYA RREPLQWFNF FDFWRDDSKV NRATSAPQTT AALPELERTT
DRTEHL