Gene Shewana3_0332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0332 
Symbol 
ID4479068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp366472 
End bp368991 
Gene Length2520 bp 
Protein Length839 aa 
Translation table11 
GC content53% 
IMG OID639724864 
Producthypothetical protein 
Protein accessionYP_867981 
Protein GI117918789 
COG category[R] General function prediction only 
COG ID[COG4258] Predicted exporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCCCA AGATTGCCAC GCGTATTGGC CACAGCCTGA TGCAAACCTC AACTAAATGG 
CGCTTCGCTA TTTGGTTGTG TTTGATGCTG GCGGCGAGCC TGTGGACGCT GCAACTGTGG
CAAAATGGGG CAAAGGTACA AAGCGATATT CTCGCCATGT TGCCCCATCT TCAGCAGGAC
GCACTCACGG CGCGCGCCCT CGAACAAGTG GAATCGACAC TCGCCGATCA AGTGTATCTC
GCCCTGATTG CCAAGGATGA ACCTCAGGCG ATTGCGGCGG CCACACTCCT GATGGAGCAG
CTTAAGACTC AAAACACCGC CTTTACCGAT ATTCGCAGCG CCGATCTGCA AATGGGTGAA
GCCCTAGGGC AATTTTATTT GCCCTATCGC TTTAAACTGC TCACACCTGA GCAAACCGAA
GCCTTAAGCC ATAATGGCCT CGAGCACTTA ATTGCCTCAG CCACTCAGCA GCTCTACAAC
GCCTTTAGTT ATGCCAATAG CCAACTCTTG ACCCAAGATC CTTTGCTGTT GTTCCCCGAC
AATTTGCTCG CCCTTGCGCC TAGTTCGAAG CTGAGCGCCA ACCAAGGGAT TTTACTTGCT
CATCCACAAA GTGTTGATAC CAAACAAGGT GTTAATAGCA GTGAAGGCGT GGCCGCCATT
GTGATGGCAA AGGGCACCGA AAGCGCCTTT AACCCTAATG CGCAATTACG CCAGCAAGCG
GCACTGACTC AGGCACTGAA TGCCGTCAGC GCGCAATACC CCAGCATTAA AGTGTTACAG
GCGGGCGCGC TGTTCCATGC CATCGAGGCT ACCAATACCG CGAAGAGTGA AATCTCTGTC
CTCGGTCTCG CCTCTTTGCT TGGCGTAGTG TTATTGGTTT GGCTAGCGTT TCGCTCCGTG
ATGCCACTCT TGCTGGCGAT GGTGACAATC GGCAGCGGCC TGCTGCTGGC GGTGACTTTT
ACCTTAAGCG TGTTCGGGGA GCTACATTTA CTCACTCTCG TCTTTGGCAC CAGCCTGATT
GGGATTGCCA TCGACTACAG CTTCCATTTT TACTGTGAGC GGTTAAGCGA TCATCAGCGT
AGCGCGCAGG CGACCGTGGC CTATATCTTC CCCACAGTGT CACTGGCCTT TATCACCAGT
GCCTTAGCCT ATGTCGGTAT CGGTTTAGCG CCGTTTCCTG GCATGCAGCA AGTAGCGATT
TTCTGCGCCT CGGGTTTACT CGGCGCCTAC CTGACGTTAG TGCTCGCCTA TCCATTATTG
GCGGGCAGCA AGTTACCTTC GGGAGAGCGT CCGCTAAACC TTGCTCAGGC CTATCTTGCG
AAACTCACCG GATTCTCCAA TAAACTGATC TCGCCATGGG GATTGAGTCT GTTTGCCTTA
GTGCTCGCGG GAGTCTGCCT ATTGGGGATC AGCAAGCTTA ACGTCGACGA TGATATTCGC
CATTTACAGC AAAGCCCTGC GAGTGTGACT GAGCCTGAAG ACAAACTCAG AAAATTACTC
AGTGGCGGCA CAGATAACCA GTTTTTATTG GTGCGCGCCC CCAGCGAAGA AGCCTTACTG
CAACGGCTCG AAGCCCTCAG TCCGCAGCTC GATGCCGCCA TTAAACAGCA AGAGCTGGGC
AACTATATCA GCCTCAGCCG TTATCTGCCG AGCAAGCAAA AGCAGGATGC GGCGTATCAA
TTACAGAGCA AGATTTACCA GTCGCAATTA ACCACAGTGC TAAACAGCAT TGGCCTAGAT
GACGGCCTAG CACCTGAGCT TTCTGCCACC TACCTTGCCG CCAAGGATAG CTATATCACC
CCGACGGATT TTTTCGAACT GGGCCTAGGC AAACAGCTAG CCCCACTCTG GCTTGCACCA
CAGGGATTCG CGCCGCTTGG GCACTCAACA GAGTCAGCAA CCAGCCCCGA TAATGCCAAC
CTAGGGAACG ATAGCCACGG CACCATAGTG CTGCTCGGCG GTATTGAAGA TATTGCGGCC
CTCAAGGCAC GCTTTGTCGA GGATCCGCTG GTGCAGCTTA TTGATAAAGT CGCGGATATC
TCCACTGTGA TGGGGCATTA TCGCCTGCTT ACGCTCAAGT TATTGGGGCT GGCGCTCGTT
ATCGCCCTCT TGCTATTTAG CCTGAGTTTT GGCGTTAAAA GAGCCGCCCT AGTGGTCGCC
GTACCCGCGC TGGCGGCCTT ACTCACCTTG GCCATTTTAG GCTTAGCCGG CTCGCCCTTA
AGCTTGTTTC ATGCGCTGGC GCTGATTTTA GTCTTCGGGA TTGGGATAGA TTACAGTTTG
TTCTTTGCCT CTGCAGCGCA ACATGGCAAG GCAGTGATGA TGGCGGTGTT TATGTCCGCC
TGCTCGACCC TATTGGCCTT TGGCTTACTC GCCTTTAGCC AAACCCAAGC TATTCATTAT
TTTGGATTGA CCCTATCCCT CGGCATAGGG TTTACCTTTG TACTTTCGCC ATTGATTTTG
ACCACCAGTC AGGTTTTAAC CACCAACAAG GTCTCGATAC CTACAAGGAA TGTTATTTAA
 
Protein sequence
MAPKIATRIG HSLMQTSTKW RFAIWLCLML AASLWTLQLW QNGAKVQSDI LAMLPHLQQD 
ALTARALEQV ESTLADQVYL ALIAKDEPQA IAAATLLMEQ LKTQNTAFTD IRSADLQMGE
ALGQFYLPYR FKLLTPEQTE ALSHNGLEHL IASATQQLYN AFSYANSQLL TQDPLLLFPD
NLLALAPSSK LSANQGILLA HPQSVDTKQG VNSSEGVAAI VMAKGTESAF NPNAQLRQQA
ALTQALNAVS AQYPSIKVLQ AGALFHAIEA TNTAKSEISV LGLASLLGVV LLVWLAFRSV
MPLLLAMVTI GSGLLLAVTF TLSVFGELHL LTLVFGTSLI GIAIDYSFHF YCERLSDHQR
SAQATVAYIF PTVSLAFITS ALAYVGIGLA PFPGMQQVAI FCASGLLGAY LTLVLAYPLL
AGSKLPSGER PLNLAQAYLA KLTGFSNKLI SPWGLSLFAL VLAGVCLLGI SKLNVDDDIR
HLQQSPASVT EPEDKLRKLL SGGTDNQFLL VRAPSEEALL QRLEALSPQL DAAIKQQELG
NYISLSRYLP SKQKQDAAYQ LQSKIYQSQL TTVLNSIGLD DGLAPELSAT YLAAKDSYIT
PTDFFELGLG KQLAPLWLAP QGFAPLGHST ESATSPDNAN LGNDSHGTIV LLGGIEDIAA
LKARFVEDPL VQLIDKVADI STVMGHYRLL TLKLLGLALV IALLLFSLSF GVKRAALVVA
VPALAALLTL AILGLAGSPL SLFHALALIL VFGIGIDYSL FFASAAQHGK AVMMAVFMSA
CSTLLAFGLL AFSQTQAIHY FGLTLSLGIG FTFVLSPLIL TTSQVLTTNK VSIPTRNVI