Gene Shewana3_0329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0329 
Symbol 
ID4479065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp363111 
End bp364328 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content55% 
IMG OID639724861 
Product3-oxoacyl-(acyl carrier protein) synthase I 
Protein accessionYP_867978 
Protein GI117918786 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.82571 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAACA GAGTCGCCAT TACACAAATT GGATTGTGTA CCCCGTTAGG GCAAACGCCC 
GAGCAGGTGT TAGCCCGCTT GATTGCAGGC GATACCAGTG CCATGCAAAC CAGTGAAACC
CTGCTATTTG AGGAGTCGAC ACTGGTTGCG CCCGTCACTG AGTCGTTACC GACGATACCT
GCCGCGCTGG CGCAATTCGA TTGTCGCAAT AATCAGTTGC TCCTTGCTGC CGCACTGCAA
ATTCGCGATG CCGTAGAGCA AGCCAAAGGT GAGTTTGGCG CCGACCGTAT CGGCGTGGTC
TTAGGCACCA GCACCTCGGG AATTTCGAAA GGCGAAGCCG CCTTGGCCTA TCGCAATCAA
CACGGCCACT TCCCCGCCGA TTACCATTAT TTCCAGCAGG AACTCGGTAG CACCAGCGAT
TTTCTACGCC AGTTATTTGA GCTCCAAGGC CCTTGCTACA CCATTTCGAC CGCCTGCTCC
TCTAGCGCCA AGGTATTTGC CAGCGCCAAA CGCCTACTCG AGGCCAAGCT GTGCGATATG
GTGATCGTCG GCGGTATCGA CAGCCTGTGC CAACTGACAG TCAACGGATT TCACGCCTTA
GAATCGGTTT CCAAGGGACA TTGCAACCCC TTCAGCGCCA ACCGCGATGG CATCAATATC
GGTGAAGGCG CCGCGCTATT TACTCTGACC TTAGCGACAG ACAACACAGC AAATGAAGCC
TGCGTTTTGC TTGCAGGCAT AGGCGAGTCG AGCGATGCGC ACCATATGTC GGCGCCACAT
CCCGAAGGTG CGGGGGCAAT TGCCGCCATG CAGGCCGCGC TTGATGATGC ACAGATATCG
GCGCAACAGA TTGATTATAT AAACTTACAT GGTACAGCAA CGCCTAAAAA TGATGCGATG
GAAAGCCGTG CCGTAGCCTC GGTATTTGGC GACACGCCGC CACCCGCAAG CTCAACCAAA
CCGCTGGTCG GCCATACCTT AGGTGCCGCG GGCGCGATTG AAGCCGCATT TTGTTATTTA
CTGCTCTCAC CCCATAATCA CCATCTTGCC CTGCCTCCCC ACAGGTTTGA TGGGCAGCCA
GATCCACAGG ATCCCAGCAT AGCCTTAGTC GCGCCCAAAC AATGTGCCGA GCATGGCAGG
CTGAACTATG TGATGAGCAA CTCCTTCGCC TTTGGCGGCA GCAATGCCTG CCTGATTTTT
TGCCGTAAAG GGGCTTAA
 
Protein sequence
MNNRVAITQI GLCTPLGQTP EQVLARLIAG DTSAMQTSET LLFEESTLVA PVTESLPTIP 
AALAQFDCRN NQLLLAAALQ IRDAVEQAKG EFGADRIGVV LGTSTSGISK GEAALAYRNQ
HGHFPADYHY FQQELGSTSD FLRQLFELQG PCYTISTACS SSAKVFASAK RLLEAKLCDM
VIVGGIDSLC QLTVNGFHAL ESVSKGHCNP FSANRDGINI GEGAALFTLT LATDNTANEA
CVLLAGIGES SDAHHMSAPH PEGAGAIAAM QAALDDAQIS AQQIDYINLH GTATPKNDAM
ESRAVASVFG DTPPPASSTK PLVGHTLGAA GAIEAAFCYL LLSPHNHHLA LPPHRFDGQP
DPQDPSIALV APKQCAEHGR LNYVMSNSFA FGGSNACLIF CRKGA