Gene Shewana3_0328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0328 
Symbol 
ID4479064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp362566 
End bp363105 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content53% 
IMG OID639724860 
Productthioester dehydrase family protein 
Protein accessionYP_867977 
Protein GI117918785 
COG category[I] Lipid transport and metabolism 
COG ID[COG4706] Predicted 3-hydroxylacyl-(acyl carrier protein) dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.96968 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAGTT CTACTGACAC TGCAATGGCA CCCGCCGAGC CGATGTGGCT GCAACAATTA 
GCCGAGCAGA ATATTGCCGA TTTTATTCCG CACCGCGCGC CAATGATCTT GATTGATAAG
ATTATTCGCC ATCAGCAGGA TGCGCTCGAA ACCGAAGTGC AGATCACTCC TCTGAGTGCT
TATTTTGACG AGCAACGTCA GGCCGTTCCC AATTATGTGG GTATCGAGTA TATGGCACAG
AGCATCGCGG CCCTCGCCGG CGTCGAGGCC AAACTGCGCC ACGATAAAAT CCGAGTAGGT
TTTTTATTGG GATCGCGTAA ATTAGCCTTG CACACAGCGC AGTACGAACT CAATCGCCGC
TACCGCACTC GGGTTAAACG CCTCTATCAG GAAGAGTCGG GACTGGCGGT ATTCGATTGC
CAGATTTATC TGTTGCCCGA GGCGGGAGCG GAGCAAACAC CACAACTCGT GGCCGAGGCC
AATGTGAACG TGTTCCAACC CCAGGACACC CAAGCGTATA TCGCCTCCAG TCAGGCTTAA
 
Protein sequence
MSSSTDTAMA PAEPMWLQQL AEQNIADFIP HRAPMILIDK IIRHQQDALE TEVQITPLSA 
YFDEQRQAVP NYVGIEYMAQ SIAALAGVEA KLRHDKIRVG FLLGSRKLAL HTAQYELNRR
YRTRVKRLYQ EESGLAVFDC QIYLLPEAGA EQTPQLVAEA NVNVFQPQDT QAYIASSQA