Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0328 |
Symbol | |
ID | 4479064 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 362566 |
End bp | 363105 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639724860 |
Product | thioester dehydrase family protein |
Protein accession | YP_867977 |
Protein GI | 117918785 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG4706] Predicted 3-hydroxylacyl-(acyl carrier protein) dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.96968 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAGTT CTACTGACAC TGCAATGGCA CCCGCCGAGC CGATGTGGCT GCAACAATTA GCCGAGCAGA ATATTGCCGA TTTTATTCCG CACCGCGCGC CAATGATCTT GATTGATAAG ATTATTCGCC ATCAGCAGGA TGCGCTCGAA ACCGAAGTGC AGATCACTCC TCTGAGTGCT TATTTTGACG AGCAACGTCA GGCCGTTCCC AATTATGTGG GTATCGAGTA TATGGCACAG AGCATCGCGG CCCTCGCCGG CGTCGAGGCC AAACTGCGCC ACGATAAAAT CCGAGTAGGT TTTTTATTGG GATCGCGTAA ATTAGCCTTG CACACAGCGC AGTACGAACT CAATCGCCGC TACCGCACTC GGGTTAAACG CCTCTATCAG GAAGAGTCGG GACTGGCGGT ATTCGATTGC CAGATTTATC TGTTGCCCGA GGCGGGAGCG GAGCAAACAC CACAACTCGT GGCCGAGGCC AATGTGAACG TGTTCCAACC CCAGGACACC CAAGCGTATA TCGCCTCCAG TCAGGCTTAA
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Protein sequence | MSSSTDTAMA PAEPMWLQQL AEQNIADFIP HRAPMILIDK IIRHQQDALE TEVQITPLSA YFDEQRQAVP NYVGIEYMAQ SIAALAGVEA KLRHDKIRVG FLLGSRKLAL HTAQYELNRR YRTRVKRLYQ EESGLAVFDC QIYLLPEAGA EQTPQLVAEA NVNVFQPQDT QAYIASSQA
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