Gene Shewana3_0319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0319 
Symbol 
ID4479055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp354235 
End bp354810 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content54% 
IMG OID639724851 
ProductXRE family transcriptional regulator 
Protein accessionYP_867968 
Protein GI117918776 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000379854 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACCA TCAACAGCTA TCTTGCCGCG ACCCTAAAAC AACTGCGCAG CCAAAAGGGT 
TGGAGCTTAG ATAAAGCGGC ACTCGAGACA GGCGTAAGCA AGGCCATGAT AGGCCAGATT
GAGCGCGGCG AATCTAGCCC CACCATTGCT ACCCTGTGGA AAATCGCCAG CGGTTTTAAT
ATCTCACTCT CGACTTTTCT GGAGCCGACA CCCGAGAGCC AAGGCGCCCT CTTTCGTAAC
GCCGATGCAT TACGCCAAAA GCCAGCAACC GACGGCATGT TAGTGGCGTC GCTATTTCCC
TTTGAGCCAC GCTTTGGTTT TGAGATGTTT GAACTCACCC TATTGCCGCA CTATGAGCGC
CTCTCCGAGC CCCATGAGGC GGGTGTGACC GAGCATGTGA TCGTGCTCAG CGGCAACATG
GAAGTGTTAG TCGATGGCCA GTGGCAGCCA TTACAACAGG GCGAAGCCGT GCGCTTTGCC
GCCGATAAAC CCCATGGTTA CCGTAACTTA AGCGATCTAC CCGTAGTATT TCATGATCTA
ATCCACTACC ACAGAGCATC GTCTACCGCG GAGTAA
 
Protein sequence
MQTINSYLAA TLKQLRSQKG WSLDKAALET GVSKAMIGQI ERGESSPTIA TLWKIASGFN 
ISLSTFLEPT PESQGALFRN ADALRQKPAT DGMLVASLFP FEPRFGFEMF ELTLLPHYER
LSEPHEAGVT EHVIVLSGNM EVLVDGQWQP LQQGEAVRFA ADKPHGYRNL SDLPVVFHDL
IHYHRASSTA E