| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0316 |
|---|
| Symbol | |
|---|
| ID | 4479052 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 352952 |
|---|
| End bp | 353548 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 639724848 |
|---|
| Product | azoreductase |
|---|
| Protein accession | YP_867965 |
|---|
| Protein GI | 117918773 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1182] Acyl carrier protein phosphodiesterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.001628 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAAAG TCCTAGTGTT AAAATCCAGT ATTCTTGGCG GTTATTCACA ATCTGCCTTG
TTAGTTGACC ACCTTATCGG TAAATGGGAA GACCAAGGCG CGACCATCAC AGTTCGCGAT
TTAGCGGGTA AAGATGTGTT GCCAATGGTT GATGGTGAAA TTGCCTCTGG CCTACGTGGC
GGCGCTGAGT TAACTGCACG TCAGCAAGAG ATGCTCGACC TGTCTAACGC CTTAGTTGAA
GAGTTAAAAG CGAACGACAC TATCGTGATC ACCGCGCCTA TGTACAACTT CAACATTCCA
ACCCAGCTGA AAAACTGGAT TGATTTTGTG GCCCGTGCAG GTGTGACTTT CACTTATACC
GAAAACGGCC CTAAAGGCTT AGTGGAAGGT AAACGCGCTG TGTTGATCAC CACCCGTGGT
GGCGCCCATA AAGATGGTCC AACGGATCAC ATTGTGCCTT TCTTAAAAAC TTTCCTCGGC
TTTATCGGTA TCACCGACGT GGAAGTGGTT TATGGCGAAG CGCTGAACAT GGGCCCAGAA
GCCAACCAAA AAGGTATCAG CGAAGCGAAA CAAAGCCTCG ATGCGTTAAC CGTTTAA
|
|---|
| Protein sequence | MSKVLVLKSS ILGGYSQSAL LVDHLIGKWE DQGATITVRD LAGKDVLPMV DGEIASGLRG
GAELTARQQE MLDLSNALVE ELKANDTIVI TAPMYNFNIP TQLKNWIDFV ARAGVTFTYT
ENGPKGLVEG KRAVLITTRG GAHKDGPTDH IVPFLKTFLG FIGITDVEVV YGEALNMGPE
ANQKGISEAK QSLDALTV
|
|---|
| |