Gene Shewana3_0312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0312 
Symbol 
ID4479048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp350384 
End bp351289 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content49% 
IMG OID639724844 
Productprolyl aminopeptidase 
Protein accessionYP_867961 
Protein GI117918769 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID[TIGR01249] proline iminopeptidase, Neisseria-type subfamily 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.361295 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.544281 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGGCA ATGGGCAGCA GTTGCATCTT GCACAATATG GTAATCCGCA GGGTATTCCA 
CTGCTGTATT TGCATGGCGG TCCAGGGGCG GGAGCTTCGG TCAGTGAACT GAGTTTATTT
AACCCCGAGC ACTACTGGAT TTTACTGCTA GATCAACGTG GTGCGGGACA ATCACTGCCT
ACTGGCGAGT TGGAGCATAA TCATTTAAAT GGACTTATCA GCGATATTGA GGCGATTCGC
ATTCACTTAG GCATAGAACG TTGGTGCTTA GCGGGTGGCT CATTTGGCGC CACCTTAGCC
TTAATTTACA GTGGTTTATT TCCCCATCGA GTGATTGCCC AAGTGCTGTG GGCGGTGTTT
ATTCCCTCAG AGGCCGGTAT TGAATGGCTC TATGCCCCCT CGGGCGCAGC GCAGTTATAT
CCGCAGGCTT ACCGTGAATT TGCTGCACCT TCTATTGGTT TGGCGGATTT ATTTACGCAC
TATCAGCTAG GATTTAACGC CCAAGATGAA GCAACCCGTC ATGAATTTGC CCGTCGCTGG
ATCCAATGGG AATTAACCTT AGCGGGCGTA CCAACAGGCT TGCCGAAGCG GCTTGCGGCG
CCTTTGCTAG CCTTAGCTCA AATTGAGTTG CACTATGCAA AAAATGATTA CTTCAATATG
TTCAGCATAT TACAGCGGGT GACATCACAA GTCACAGCGC GTACCCTGCT ATTACAAGGC
ACACAGGATG CTGTCTGTCC GGCACGTTTA TTAGCCGCAT TTTTGGCAAA AATCGACAAC
CCTAGGATAC AAATTCATAC CATTGTCGAT GGTGGGCATT CGCTGAATAG TGACATACTC
CCACTTGCCG TCACACTCGA GATCCAAGCC ATGTGGACTT GGATAAAGCG ACAGGAGCTA
GCATGA
 
Protein sequence
MMGNGQQLHL AQYGNPQGIP LLYLHGGPGA GASVSELSLF NPEHYWILLL DQRGAGQSLP 
TGELEHNHLN GLISDIEAIR IHLGIERWCL AGGSFGATLA LIYSGLFPHR VIAQVLWAVF
IPSEAGIEWL YAPSGAAQLY PQAYREFAAP SIGLADLFTH YQLGFNAQDE ATRHEFARRW
IQWELTLAGV PTGLPKRLAA PLLALAQIEL HYAKNDYFNM FSILQRVTSQ VTARTLLLQG
TQDAVCPARL LAAFLAKIDN PRIQIHTIVD GGHSLNSDIL PLAVTLEIQA MWTWIKRQEL
A