Gene Shewana3_0311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0311 
Symbolrbn 
ID4479470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp349274 
End bp350287 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content50% 
IMG OID639724843 
Productribonuclease BN 
Protein accessionYP_867960 
Protein GI117918768 
COG category[S] Function unknown 
COG ID[COG1295] Predicted membrane protein 
TIGRFAM ID[TIGR00765] YihY family protein (not ribonuclease BN) 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.415793 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTAAGA AGATAGAACT GGCACAAATT CAAGTCTTAT TCCTCGGGAT CTGGCGCTTC 
CTGCTGCATT TACGCCAGCG TTTAGTGGAA GATCAAATCA ATATCCGCGC CGGCCACTTA
GCCTATGTCA CCCTGTTATC CCTTGTGCCT ATGGTGGCCG TGACTATGTC GATGCTGTCG
GCTTTCCCTG TGTTTAAGGG GATCCGTGGC CAAATCGAAG CCTTCGTTTA TGAGAATTTT
CTGCCCGCGG CGGGCGATAC GGTACAAGTC TATATTAATG AATTTGTTGG CAATGCCTCT
AAGGGCACGG CAGTGGGGAT CGCGGCTCTG GTCGTGGTGG CGATTATGCT GATCTCCGCC
ATCGATAAAT CGCTGAATAA TATTTGGCGT ACTAAGGAAA AGCGTTCAGT GGTGGTGGCC
TTTTCCATGT ATTGGATGGT GATTACCTTA GGCCCAGTGC TGGTGGGCGC GAGCCTAGTG
GCGACTTCCT ACGTGGTGTC ATTAAAACTG TTTGAGGGCG ACGCCTTATC TGGGGTGATG
CCGCTATTTA TCGAGCGCTT GCCTATGCTG TTTTCGGTGG CAGCGTTTTT ACTGCTCTAT
ATGGTGGTGC CGAATCAAAA GGTGAAGTTT TGGCATGCGC TATTAGGCGC GGTAGTGGCG
GCCTTACTGT TCGAGTTGGG GAAAAAAGGC TTTGCCCTGT ATGTGACTAA ATTCCCAAGT
TATGAGGCCA TTTACGGCGC ATTGGCGACC ATCCCTATTC TGTTTGTTTG GGTCTATTTA
TCTTGGATGA TAGTGTTGCT GGGCGCCGAA ATTACCGCGG CCATGCCTGA GTATTTGGAC
TATGAGTCTA GCAGCAATAT CAACGAAACC AATCTCGATG GTGAGCCTTT AGCGGCGCAG
AATACACCCG CCGTGGAGCC AGAAACCATA TCTGCCCAAT CAAGCCAAGA GGTTGATACG
ATGGGTGAAC TTGCCGCAAA CGCGCCGCAA TCGACTACAC TGGATAAGCC GTAG
 
Protein sequence
MTKKIELAQI QVLFLGIWRF LLHLRQRLVE DQINIRAGHL AYVTLLSLVP MVAVTMSMLS 
AFPVFKGIRG QIEAFVYENF LPAAGDTVQV YINEFVGNAS KGTAVGIAAL VVVAIMLISA
IDKSLNNIWR TKEKRSVVVA FSMYWMVITL GPVLVGASLV ATSYVVSLKL FEGDALSGVM
PLFIERLPML FSVAAFLLLY MVVPNQKVKF WHALLGAVVA ALLFELGKKG FALYVTKFPS
YEAIYGALAT IPILFVWVYL SWMIVLLGAE ITAAMPEYLD YESSSNINET NLDGEPLAAQ
NTPAVEPETI SAQSSQEVDT MGELAANAPQ STTLDKP