| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0303 |
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| Symbol | |
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| ID | 4479462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 339908 |
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| End bp | 340669 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639724835 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_867952 |
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| Protein GI | 117918760 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0267314 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTTAC TGAATAAAAC CGCGGTGGTG ACGGGGGCTG CCGGGGGCAT AGGGCAAGCG
ATCATCCGTA AACTACTCGC CGAAGGGGCT CGCGTTGTTG CTGCCGATCT GTCGGCCGAT
GCGCTCAAAG TATTTAACGA TTTTCCCGCC GATAAGTTGG TGACTTTTAG CGTCGATGTG
ACCGACTACA AGCAAGTTGA AGCCATGGTC AAGCATGCGG CTGACCAGTT CGGTCAGCTC
GATATTCTGA TCAATAATGC CGGCATAGGC TTGGCTAAGC CGCTGTTACA GCATGATCCT
ATTAATGATT TTGAACCTGT CACCAATGTA AACCAAAAAG GCGTGTACCA CGGCATCCTT
GCCGGTGGCC GTCAATTCCA AGCCCAAGGC TCTCGGGGCG TGATTTTAAA TACTTCGTCG
GTTTACGCGC AGATCGCCTC AGAAATGACT TTCACCTACA ACGTCAGTAA AGCCGCCGTC
GACATGATGA CCAAATGCGC CGCGCTTGAA CTGGCGCCGC TTGGCGTGCG GGTTTGCGCC
GTGGCGCCGG GCCGTGTCGA CACACCTATG CTGCGTCAAT ACGAGGCGCT CGGGTTGTGG
GAACACATTC GTAAAGAGCA AATGCGTCAA GAATTTACCC AACCGAATGA GATTGCCGAT
GTGGTGGCGT TTCTGGTTAG TGACGAGGCC AACTGCATCA ATGGCTGCAC AGTGAACGCC
TCCGACGGCT TTGAAAACTT TAAATATCCA CTGCTGGGGT AG
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| Protein sequence | MRLLNKTAVV TGAAGGIGQA IIRKLLAEGA RVVAADLSAD ALKVFNDFPA DKLVTFSVDV
TDYKQVEAMV KHAADQFGQL DILINNAGIG LAKPLLQHDP INDFEPVTNV NQKGVYHGIL
AGGRQFQAQG SRGVILNTSS VYAQIASEMT FTYNVSKAAV DMMTKCAALE LAPLGVRVCA
VAPGRVDTPM LRQYEALGLW EHIRKEQMRQ EFTQPNEIAD VVAFLVSDEA NCINGCTVNA
SDGFENFKYP LLG
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