| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0302 |
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| Symbol | |
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| ID | 4479461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 338762 |
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| End bp | 339769 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639724834 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_867951 |
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| Protein GI | 117918759 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00847294 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTACCTAG TCCGAAGTGG TGCCGTCGCT CAATTCGAGC AACTGGTCCT AGAATTGGGG
GAAAACCCCA TAGAAATGAT CCATCAGGCT GGATTGCGTC AGGCGCAGTT TCGCGATCCC
AACACCTATA TCGCTTATCC GCGGCTAGCC GAGTTATTGG AAATTGCTGC GCAGCGCTGT
CAGCACCCCT TGTTTGGCTT AATGCTGGCC CAGCGACAAA CTTTGCATGT ATTGGGTGAT
TTACCTATGC TGGTTTCCCG CGCGGCCACT GTGGCCGATG CGCTGGCCCG CGTGAATGAC
TATCTGTATC TGCACGCCTC AGGCGTATCA TTACAACTGC AATCTCAGGG TGAAATTGTC
CGCCTTGCAC TATCGATGAA TGTTCACAGC CCTAGGGGCA TAGAACAACT GATGCAAATG
AGCGTGGCGC AGCTGGCAAT GTTTGTCTCG AGCCTGCTGA ATATCAATAT CAGCAACGTT
CCTTTGTATT TATGCCAAAA CAAACCCAGC GAACAGGAAT CTCAGCGCCT TACCCACTCG
GTGCGTTTTC GCGAGCCCTT TAATGGCGTA GTGGTCAAGG CCTCGCAACT GACGGGGCGT
AACTATCACG ATGAAGAGGC GCTTAATCGC CACCTCCAGT CGCACCTGCA ATATTTACAG
AGCCGCTACC CCGACAATCT TGCCGACCAA GCACGGGACT TAATCCATCG GCTGCTGCCC
ACGGGAGAAT GCTGCATCGA AAGGGTATCG ACGGCGCTGG GTTTACACGA ACGCACCCTA
CAAACGAGGC TGCAAGAGAC GGGGCAAAGC TATCGACAAT TACTACAGGA TGTTCGGCAA
AATATCGCCC AACAGCAACT CAGCTACGGC ACGCAAACCA TCACCGAACT CGCACTGCAA
CTCGGTTATG CCGAAGTCGC CGTATTTAGT CGCCACTTTA AAACTTGGAC AGGATTTTCC
CCAAAACAAT GGCAACAACA GTATCGTAAG GGGCGAATTG AGGATTGA
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| Protein sequence | MYLVRSGAVA QFEQLVLELG ENPIEMIHQA GLRQAQFRDP NTYIAYPRLA ELLEIAAQRC
QHPLFGLMLA QRQTLHVLGD LPMLVSRAAT VADALARVND YLYLHASGVS LQLQSQGEIV
RLALSMNVHS PRGIEQLMQM SVAQLAMFVS SLLNINISNV PLYLCQNKPS EQESQRLTHS
VRFREPFNGV VVKASQLTGR NYHDEEALNR HLQSHLQYLQ SRYPDNLADQ ARDLIHRLLP
TGECCIERVS TALGLHERTL QTRLQETGQS YRQLLQDVRQ NIAQQQLSYG TQTITELALQ
LGYAEVAVFS RHFKTWTGFS PKQWQQQYRK GRIED
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