Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0295 |
Symbol | |
ID | 4479454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 328100 |
End bp | 329221 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639724827 |
Product | aminotransferase, class V |
Protein accession | YP_867944 |
Protein GI | 117918752 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0520] Selenocysteine lyase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0000286273 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTGCTAA ATGTAAAACA AGACTTTTGC CTCGCAGGCC CAGGCTATTT GCTTAACCAT TCAGTGGGGC GGCCACTCAA ATCGACCGAA CAGGCATTTA AGCAGGCATT TTTTGCGCCC TGGCAAGAGT CTGGCCGCGA GCCTTGGGGT CAATGGTTGG GCGTCATCGA TAACTTTACC GCGGCGCTGG CGAGCCTATT CAATGGTCAA CCACAGGATT TTTGCCCGCA GGTGAATCTA TCGAGCGCAT TGACCAAAAT TGTGATGTCC CTCGATAGAT TAAATCGCGA TGGCGCCGTG GTGCTGATGA GCGAGATTGA TTTTCCCAGC ATGGGGTTTG CCCTGAAAAA GGCATTGCCC GCAAGCTGTG AATTGCGCTT TATTCCCAAG GGTTTAGATG TCACCGACCC CAATGTGTGG GACGCGCATA TTTGTGCCGA TGTCGATTTA GTCTTTGTTA GCCATGCTTA TTCCAATACG GGTCAGCAGG CGCCATTGGC GCAGATCATT CCCCTTGCCC GTGAGCGTGG CTGCTTGAGC CTAGTGGATG TGGCGCAATC GGCTGGGGTT TTGCCGCTGG ATTTAGCCAA GCTACAGCCG GACTTTATGA TTGGTTCGAG TGTGAAATGG TTATGCTCAG GCCCTGGGGC TGCGTATCTG TGGGTCAATC CGGCGATTTT GCCCCAGTGT CAGCCGCAGG ATGTGGGTTG GTTTAGCCAT GAAAATCCCT TCGACTTTGA TATCCATGAT TTTCGCTATC ACCCAACTGC GCTGCGGTTT TGGGGTGGTA CACCTTCTAT CGCGCCCTAT GCGATTGCTG CCCACAGCAT TCAATATTTT GCCAATATTG GCTCACAGGC GATGCGTGAA CATAACTTGC AGTTGATGGA GGCAGTTGTA CAGACATTAG AGCCTGAGTT GGTCTCGCCG CGGGAAGCCG ATAAACGCAG TGGCACCTTG ATCCTACAAT TTGGCGAGCG CCAAGCACCC ATCATGGCGG CGTTGGCGGA GGCGAATATC AGTGTCGATG CCCGCAGTTT AGGAATACGC GTATCGCCGC ATATCTATAA CGATGAGGCC GATATCGCGA AATTGCTGGA GGTAATAAGA GCCCATCGTT AA
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Protein sequence | MLLNVKQDFC LAGPGYLLNH SVGRPLKSTE QAFKQAFFAP WQESGREPWG QWLGVIDNFT AALASLFNGQ PQDFCPQVNL SSALTKIVMS LDRLNRDGAV VLMSEIDFPS MGFALKKALP ASCELRFIPK GLDVTDPNVW DAHICADVDL VFVSHAYSNT GQQAPLAQII PLARERGCLS LVDVAQSAGV LPLDLAKLQP DFMIGSSVKW LCSGPGAAYL WVNPAILPQC QPQDVGWFSH ENPFDFDIHD FRYHPTALRF WGGTPSIAPY AIAAHSIQYF ANIGSQAMRE HNLQLMEAVV QTLEPELVSP READKRSGTL ILQFGERQAP IMAALAEANI SVDARSLGIR VSPHIYNDEA DIAKLLEVIR AHR
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