Gene Shewana3_0273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0273 
Symbol 
ID4479181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp307775 
End bp309424 
Gene Length1650 bp 
Protein Length549 aa 
Translation table11 
GC content52% 
IMG OID639724805 
Productelectron transfer flavoprotein-ubiquinone oxidoreductase 
Protein accessionYP_867922 
Protein GI117918730 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.134326 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000385441 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAACGCG AATCAATGGA ATTCGATGTT GTTATCGTCG GCGCAGGCCC AGCTGGCTTG 
GCCACTGCGT GTCGGTTGAT GCAGATATCA CAGAGTTCAG GTAAAGAGAT TACCGTCTGC
GTGGTAGAAA AAGGCTCCGA AGTGGGTGCG CACATTCTAT CTGGTGCCGT ATTCGAACCA
CGAGTGTTAG ATGAGCTATT CAGCGACTGG CGCGATTCAG GCGCTCCCGT CACCACAGCT
GTGACTCACG ATGAAATCTA TCTACTCAAT TCCGCCACCG ACAGCAAGCT GATGCCCAAT
GCGTTTGTGC CTAAAACCAT GCACAACGAA GGCAACTATA TTGTCAGCGT AGGTAACCTC
TGCCGTTGGC TCGCGACCCG CGCCGAAGCG CTCGGCGTAG AAATCTTCCC TGGCTTTGCT
GCCAGCGAAT TACTCTTCAA TGAAGATAAC AGCGTGAAGG GTATCCTGAT TGGCGATATG
GGCGTCGGTG CCGACGGCCA GCCGAAAGAC AGTTTTATGC CCGGCATGGA GCTCCACGCT
AAATATACCG TATTCTCAGA AGGTTGCCGC GGTCACTTAG GCAAACAGCT GATCGCGAAA
TACCACTTAG ATAATGGCAA GACACCACAG CATTACGGCC TGGGCTTTAA GGAAATCTGG
AAAGTTCCCG CCGAACAACA CGAGCAGGGT AAAGTGGTGC ACACAGGTGG TTGGCCATTA
ACCGATGGCG CATCGGGTGG CGGCTTCCTC TACCATATGG AAGACAACCA AATTGCCGTG
GGTCTGATTA TCGACCTCAA CTACAAGAAT CCCCATTTAA GCCCGTTCGA TGAGTTCCAA
CGTTATAAGA CTCACCCAGT TATCGCCAAA TACTTAACTG GCGGCGAGCG TTTGACCTAC
GGTGCTCGTG CAATCACTAA GGGCGGGTTG AACTCACTGC CGAAGATGAG TTTCCCCGGC
GGTCTGTTGA TTGGTTGCGA TGCGGGAACC TTAAACTTTG CCAAGATCAA AGGCACCCAC
ACCGCCATGA AGAGCGGTAT TGTCGCGGCT GAAACCTTAG CCAAAGCGAT GCTGGCCGAG
GTTGAAGGCG GTAAAGATCT GGATTGTTTC CAAACCCATT TGGAAGAAAG CTGGTTACAC
GAAGAGTTGT ATAAGTCGCG CAACTTTGGC CCAGCAATGC ACAAGTTTGG CACTTTCCTC
GGCGGCGCAT TTAACTACAT AGATCAAAAC TGGTTCGGCG GTAAGTTCCC CATCACTCTG
CGTGATGAGC ACCCAGACTA TGCACAAATG GCCCCTGTCA GTGCCTACAG CAAGATTGAT
TATCCCAAGC CCGATGGCAA ACTCAGCTTC GATAAGCTCT CTTCAGTTTA CCTGTCGAGC
ACTTATCATG AGGAAGACCA GCCTTGTCAT CTGCGCTTAA AAGACAACAG CATCCCGCTC
GGGATAAACC TGACGCAATT TAACGAACCC GCCCAGCGTT ACTGCCCTGC TGGCGTGTAC
GAAATCGTTG AAGAAGCAGG CCAGCCTAAG TTTGTGATCA ATGCGCAAAA CTGCATCCAC
TGCAAAACCT GCGACATTAA AGACCCGAGC CAAAACATTA CTTGGGTGAC GCCTGAGGGT
GGCGGTGGTC CAAACTACCC GAATATGTAA
 
Protein sequence
MERESMEFDV VIVGAGPAGL ATACRLMQIS QSSGKEITVC VVEKGSEVGA HILSGAVFEP 
RVLDELFSDW RDSGAPVTTA VTHDEIYLLN SATDSKLMPN AFVPKTMHNE GNYIVSVGNL
CRWLATRAEA LGVEIFPGFA ASELLFNEDN SVKGILIGDM GVGADGQPKD SFMPGMELHA
KYTVFSEGCR GHLGKQLIAK YHLDNGKTPQ HYGLGFKEIW KVPAEQHEQG KVVHTGGWPL
TDGASGGGFL YHMEDNQIAV GLIIDLNYKN PHLSPFDEFQ RYKTHPVIAK YLTGGERLTY
GARAITKGGL NSLPKMSFPG GLLIGCDAGT LNFAKIKGTH TAMKSGIVAA ETLAKAMLAE
VEGGKDLDCF QTHLEESWLH EELYKSRNFG PAMHKFGTFL GGAFNYIDQN WFGGKFPITL
RDEHPDYAQM APVSAYSKID YPKPDGKLSF DKLSSVYLSS TYHEEDQPCH LRLKDNSIPL
GINLTQFNEP AQRYCPAGVY EIVEEAGQPK FVINAQNCIH CKTCDIKDPS QNITWVTPEG
GGGPNYPNM