Gene Shewana3_0270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0270 
Symbol 
ID4479178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp304385 
End bp305080 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content51% 
IMG OID639724802 
ProductMOSC domain-containing protein 
Protein accessionYP_867919 
Protein GI117918727 
COG category[S] Function unknown 
COG ID[COG2258] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.112146 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000109327 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCGACCT TGTTGGTAAA TAGATTATCG GGTTTGTATT TAGGGGCGGT TCTGCAAGAG 
ATTGACGGTG TTTCTACTGG TATCGACGGT AAAAAATCGG CGCAGCAGTT GCGAGTGAAT
ATCGACCGTG TCGAAGGCGA TGCGCAGGCC GATCCTAAGC ACCATGGCGG GCTCGACCGA
GTGCTGCATC ATTTCCCCCG TGAGCATTAT GGTCAGTACC GTCGCTGGGA TTTAATCACC
CAACTCGAAG ATGCGCCGAG CATGGGTGAA AACATCAGCA CGGTTGGTTT GAATGAAACC
GAGGTCAATA TCGGCGATAT CCTGCAAATC GGTGCCGTCA CAGTGCAGGT GACTCAGCCG
CGCTCACCTT GCTTTAAATT AAACCTGCAA TTTGGCCATA GAGACTTCGC CCTTGCCATG
CAGCAGAGTC AGCTATGCGG TTGGTTTTAC AGAGTATTAA CTCCAGGTGT GATTCAGCTA
AACGACAGGA TAGAATTAGT CGAGCGTAAA ACCGATATCA GTGTCGCCGA GGCCATGGCA
CTGTACTTCT CACCCGAATA CGATGCCAAA GCCTATGATA GACTCGCCTC CTGTGAAGGG
TTGGCACAAA GCTGGGTGAA TAGCCTACAG CGGCGCTTAG CGACACAGCA AGTCGAAGAT
TGGCAGATGC GCTTGTATGG GCCAAAAGGC AAATAA
 
Protein sequence
MSTLLVNRLS GLYLGAVLQE IDGVSTGIDG KKSAQQLRVN IDRVEGDAQA DPKHHGGLDR 
VLHHFPREHY GQYRRWDLIT QLEDAPSMGE NISTVGLNET EVNIGDILQI GAVTVQVTQP
RSPCFKLNLQ FGHRDFALAM QQSQLCGWFY RVLTPGVIQL NDRIELVERK TDISVAEAMA
LYFSPEYDAK AYDRLASCEG LAQSWVNSLQ RRLATQQVED WQMRLYGPKG K