| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0269 |
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| Symbol | |
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| ID | 4479177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 302810 |
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| End bp | 304267 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 639724801 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_867918 |
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| Protein GI | 117918726 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.853723 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000177476 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGCAATC ACGTTTGGAA TGATAAAAAG AAGTTTATTT GGCTACTGTC AGTGCTGTTG
CTGGTGGCCT TTTTAGTCAC CAGTGGTATT AGTTATAAAG TGGCCCACGA CTCCTTGAGT
CAGCAGATTG AGAGCAATAC TTTACCTCTA ACCAGCGATA ATATTTATTC AGAAATTCAA
CAGGATCTGC TGCGCCCCAT CTTTATTTCC TCGCTGATGG CGCAGGATAC CTTTGTGCGT
GACTGGATGT TGAATCATGA GCAAGAACCC GAAAAACTGG TCCGTTACCT CAAAGAAATT
CAAGAAAAAT ACGATACAGT CACCAGCTTT TTTGTCTCTG AGCAGAGTCG CAACTATTAC
CATTCGACGG GCATATTGAA GAAAATCCAA GATATCGATC CAAATGATGC CTGGTATTTT
CGCGTACGTT CTTTACCCGA GTCTGAGCAT TACGAAATCA ATATCGATTC AGACACCGCG
GATCGCACTA AGACAACCGT ATTTGTTAAC TATAAAGTGT TCGATTTTGA AGGTAAGTTT
ATTGGTGTTA CTGGCGTTGG CCTTGCGGTT GAGAAGGTCA AGGCATTGAT TGAACTCTAT
CAGAAGCGCT ACAACCGTCG GGTGTTCTTC ACCGATAGAC AAGGTCGTGT CACGCTCCAT
GGCGATGAGT ATGATGGTGC CGATTCGCTG CAAACCAGCG CTGGGCTTGA GCAACTCGCT
ACGCGGATTT TAACCAGCCC GAGTGCGGCC TTTAGCTACC AACGCAACGG TAAAACCGCC
TACTTAAACA GCCGCTTAGT ACCTGAATTT AAATGGTATC TTATCGTAGA GCAGGAGGAT
GCGCCGCAGG AGCAAGAGCT GCTCAATACC TTTTGGGGTA ACTTAGCTTT AAGTTTATTG
GTGACGATTG GGATTTTACT GATTTCAAAC ATGACCTTAG GTCGTTATCA GCGCAAACTT
GAGGTCATGG CTTCAACCGA TAAACTCACT GGGGCCGCTA ATCGCCAGGT GTTTGAAGAG
TATTTTCATC AGGCATTAGA GAAGGCCAAG CTATCCCAAG CGCCGATTTC CATTCTGCTT
GTCGATATCG ATCATTTTAA GAAAGTAAAC GATAGCTATG GTCATAGCAT TGGTGACCTA
GTATTAAAAA CAGTGGCTAA CCTACTAAGA AGTCAACTAA AAAACCAGGA TGTGCTGTGT
CGTTGGGGCG GTGAGGAATT CTTGATATTA GTGCCAGAGC AGGATTTAAG TCAGGCTGCT
GAACTGGCAG AACAATTTCG CGATTTAATC TCCCAACGGG AGCTTAAAGT GAATGGCGTG
CACATTGCTA TTACTGTGAG TATTGGGGTT GCCGAATACC AAAAACTCGA GCCTGCGGAA
GATTTGATTA AGCGAGCGGA TCTCGCCCTG TATCAGGCGA AAGAAGCGGG GCGCAATCAA
GTGGTTCTCA ATCAGTAG
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| Protein sequence | MGNHVWNDKK KFIWLLSVLL LVAFLVTSGI SYKVAHDSLS QQIESNTLPL TSDNIYSEIQ
QDLLRPIFIS SLMAQDTFVR DWMLNHEQEP EKLVRYLKEI QEKYDTVTSF FVSEQSRNYY
HSTGILKKIQ DIDPNDAWYF RVRSLPESEH YEINIDSDTA DRTKTTVFVN YKVFDFEGKF
IGVTGVGLAV EKVKALIELY QKRYNRRVFF TDRQGRVTLH GDEYDGADSL QTSAGLEQLA
TRILTSPSAA FSYQRNGKTA YLNSRLVPEF KWYLIVEQED APQEQELLNT FWGNLALSLL
VTIGILLISN MTLGRYQRKL EVMASTDKLT GAANRQVFEE YFHQALEKAK LSQAPISILL
VDIDHFKKVN DSYGHSIGDL VLKTVANLLR SQLKNQDVLC RWGGEEFLIL VPEQDLSQAA
ELAEQFRDLI SQRELKVNGV HIAITVSIGV AEYQKLEPAE DLIKRADLAL YQAKEAGRNQ
VVLNQ
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