Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0261 |
Symbol | |
ID | 4479169 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 292460 |
End bp | 293617 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639724793 |
Product | iron-containing alcohol dehydrogenase |
Protein accession | YP_867910 |
Protein GI | 117918718 |
COG category | [C] Energy production and conversion |
COG ID | [COG1979] Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.883451 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00000170112 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTTCAATT TCGCCTACTA CAACCCAACC CGAATCCACT TTGGTAAAAA CACCATAGCT GAAATCGATA CCTTAGTACC TCGCAATGCC AGAGTCATGG TGTTATTTGG CGGCAGCAGC GCCAGACGAA CAGGCACCTT AGCCGAAGTA AAACAAGCGC TTGGAAACCG TTTTGTGGTC GAGTTTGAAG GAATCGAGCC TAACCCAACC TACGAAACCC TGATGCAGGC TGTCGAGCAA GTTCGTGAAT TAAACATCGA CTTTTTACTC GCAGTCGGCG GCGGTTCTGT GATCGATGGT ACCAAGTTTG TTGCTGCGGC AGCGGTATTT GAAGGCGAGC CTTGGGATAT CCTCACCAGC TGGGGCGCGA ATGTGACTCA AGCCATGCCA TTTGGCTCGG TATTAACCTT GCCTGCGACG GGTTCAGAGA TGAACAACGC CAGCGTGGTG ACCCGTAAAT CGTTAAAAGC TAAACTGCCA TTCCGTAACG ACTTGGTTTA TCCGCAATTC TCAATCCTCG ACCCTACTAA GACCTTCACC CTACCAGAAA GACAAGTGGC GAACGGCGTG GTCGATGCCT TTGTGCATAT CACGGAGCAG TACCTCACCT ATCCGGTCAA TGCAGCTGTG CAGGACAGAT TCGCCGAAGG CTTACTGCAA ATTTTGATTG AACTTGGGCC TCAGGCACTC ACACAGCCCG AAGATTACGA TATTCGCGCC AACTTGATGT GGGTCGCGAC TATGGCACTC AATGGCACGA TTGCGACAGG TGTACCCCAC GACTGGGCAA CACATATGAT CGGCCATGAA CTCACAGCCT TGTATGATAT TGACCATGCC CGCACCTTAG CCATTGTATT ACCAGCATTA TTGCGCTGCA CTAAAGCCGC TAAGCGTGAA AAGCTGCTGC AGTTTGCAGA CAGAGTGTGG CATATCAACA CTGGCTCTGA AGACGAACGT ATTGAGGCCG CCATTGCGAA AACCCAAGCC TTCTTCGAGT CCATGGGCAT TGCAACTCAT TTATCTGCCT ACGATTTAGG AAAAGAAGCT GTCGATGCTG TCGTCAATCA GCTTGAACAG CATGGCATGG TTGCCCTAGG CGAGCATGGC AATATCGATC CCACTATGAG CCGCGATATT TTAACCCTAG CGCTCTAA
|
Protein sequence | MFNFAYYNPT RIHFGKNTIA EIDTLVPRNA RVMVLFGGSS ARRTGTLAEV KQALGNRFVV EFEGIEPNPT YETLMQAVEQ VRELNIDFLL AVGGGSVIDG TKFVAAAAVF EGEPWDILTS WGANVTQAMP FGSVLTLPAT GSEMNNASVV TRKSLKAKLP FRNDLVYPQF SILDPTKTFT LPERQVANGV VDAFVHITEQ YLTYPVNAAV QDRFAEGLLQ ILIELGPQAL TQPEDYDIRA NLMWVATMAL NGTIATGVPH DWATHMIGHE LTALYDIDHA RTLAIVLPAL LRCTKAAKRE KLLQFADRVW HINTGSEDER IEAAIAKTQA FFESMGIATH LSAYDLGKEA VDAVVNQLEQ HGMVALGEHG NIDPTMSRDI LTLAL
|
| |