Gene Shewana3_0255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0255 
Symbol 
ID4479163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp286869 
End bp287768 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content52% 
IMG OID639724787 
Productcation diffusion facilitator family transporter 
Protein accessionYP_867904 
Protein GI117918712 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0053] Predicted Co/Zn/Cd cation transporters 
TIGRFAM ID[TIGR01297] cation diffusion facilitator family transporter 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000211411 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000259918 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTCAGA CTTCCCAATA CGATTTTTGG GTCAAACTGG CTAGTCGCGC TTCCGTGGCT 
ACCGCTTTGA CCCTTATTCT TATCAAGCTG TTAGCTTGGT TATATTCTGG CTCGGCCAGT
ATGCTGGCGT CCTTAACGGA TTCCTTCGCC GACGCACTCG CCTCAATCAT CAACTTTATC
GCCATTCGTT ATGCCATAGT CCCCGCCGAC CATGACCACA GATACGGCCA CGGTAAAGCG
GAGCCGTTAG CGTCGCTGGC GCAATCGGCC TTTATTATGG GCTCGGCATT CCTGCTGCTG
TTTTATGGGG GAGAGCGGTT ACTCAATCCC GCCCCGGTTG AGCACGCAAC TTTAGGTGTG
GTGGTCTCAG TCGTCGCGAT TGTGTTGACA TTAGCATTAG TGATGTTGCA AAAGCGGGCG
CTGGCGGCAA CCAATAGCAC GGTAGTTGAA GCCGATTCGT TGCACTATAA GTCGGATTTA
TTCCTCAATG GCGCCGTGTT GCTCGCACTC GTCTTGTCCC AATATGGCTG GTGGTGGGCC
GATGGGCTCT TTGCTGTGCT TATCGCTTGC TATATCGGCC AACAGGCATT TGACCTAGGT
TACCGCTCTA TTCAAGCGCT GCTCGACCGT GAGCTGGATG AGGACACTCG TCAACGGATT
AAACAAATCG CTAAGGAAGA CTCCCGAGTC CAAGGGCTGC ATGATTTGCG CACACGCCAA
GCGGGTAAGA CTATCTTTAT TCAATTCCAT TTAGAGTTGG ATGGCAATTT GAGTCTGAAC
GAAGCCCACA GTATTGCCGA TACCACGGGA CTGAGGGTGA AAGCCGCCTT TGAAGATGCC
GAGGTGATTA TTCACCAAGA TCCTGTGCAG GTGGAACCTA GTGCTGCGGC CTCATCATAA
 
Protein sequence
MTQTSQYDFW VKLASRASVA TALTLILIKL LAWLYSGSAS MLASLTDSFA DALASIINFI 
AIRYAIVPAD HDHRYGHGKA EPLASLAQSA FIMGSAFLLL FYGGERLLNP APVEHATLGV
VVSVVAIVLT LALVMLQKRA LAATNSTVVE ADSLHYKSDL FLNGAVLLAL VLSQYGWWWA
DGLFAVLIAC YIGQQAFDLG YRSIQALLDR ELDEDTRQRI KQIAKEDSRV QGLHDLRTRQ
AGKTIFIQFH LELDGNLSLN EAHSIADTTG LRVKAAFEDA EVIIHQDPVQ VEPSAAASS