Gene Shewana3_0252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0252 
Symbol 
ID4479160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp283974 
End bp285323 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content51% 
IMG OID639724784 
ProductATPase domain-containing protein 
Protein accessionYP_867901 
Protein GI117918709 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00902295 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000026524 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCCTAATC GCTTATTTAT CAAGTTACTA CTCGGATTTT GGATCTGTAG CTCGCTGATT 
ATCGCTTTGG TCGGCCTGCT GCCATTGCTG CAGCAAAATC ATGACCGCGC CCCAATTCCG
CCGCATCTGC AAAAGGTGTT GGCAAGCATA GCGCAGCGTA TTCAAGACAA TCCCGAGCTA
GTCACATCTG ATTTTCTGCG CCGCTGGGAA AGACGTGGCG ATATGGAAGG CAAACCCCTT
AGGCTCTATC TGGCCAACAG CCAAGGCCAA GTGATTAATA CCAGCCGAGT GAGCCGCGGT
GTACGCAGCT TTATGCTGAT GACCGACGAG GAAAAACAGC CGATTAGTCA TCAATTTAAA
GATGAATTGG TCTTCGGCCC ACACCAATTT ACCCTTCAGG GTGAAACCTA TTATCTCTAT
GGCCGCTTGC CGGATATTCA CCCTCGCCCC TGGTTCTTCT TCTTTATCGA AAATAAGCTG
CTCACCCTAA GCCTAGCCAT AGTGCTCTCG GGATTACTGT GCGCCATACT CGCTTGGCAT
TTAGGTAAAC CATTAAACTC GCTCAAGAAA AGTGCCGATG CCCTCGCCGA AGGTGATCTC
AGCAATCGCG TCGATAAGGC GACCACTCAA CGTAACGATG AAATCGGCCA GCTCGCCACC
GCCTTTAATA GCATGGCGGA TTCGATCGAA GCCATGGTGA AGAATCAGCA ACGTTTGATG
GGGGATATTT CCCACGAACT GCGCACCCCA CTGACCCGCC TACAATTATC ACTGGCATTG
GCCCGCAAGA AAGGCCAACA GACTACGGAA ACCGACCGTA TCGCCTATGA GGCCGAGCAA
CTAGAGAAAT TGATCGCAGA GCTCTTGGAG TTGTCGCGGG TCAAACTCAG CACCAATGAG
ACTAAGGTGC GCCTCGGATT GGCCGAGTCT CTCAGTCAAG TGCTTGATGA CGCTGAATTT
GAGGCCGATC AACAGGGTAA AAAGATCACT ATCGATATCG ATGAAGCCAT CGAGCTCAGC
CATTATCCGA AATCCCTGTC CCGTGCGATA GAAAACCTGC TGCGCAACGC GATTCGTTAT
GCCCAGAGCG ATATTCATCT GCTCGCGAGC CAAGCCAACG GCCAAGTACA GATCACCATT
AAAGACGATG GTCCAGGGAT TGATCCTGCT GAGCTTGAGG CAATTTTCAA ACCCTTCTAT
CGCCCCGATT CGGCAAGACA GCGAGAAAGC GGTGGCTGGG GCCTAGGACT CGCCATTACC
GAAGCAGCCA TTAGCGCCCA TAAAGGTAAA ATCAGGGCCG AGAATCGCCA GCCCCACGGC
CTTGAAGTCA ATATCAGTTT ACCAACCTAA
 
Protein sequence
MPNRLFIKLL LGFWICSSLI IALVGLLPLL QQNHDRAPIP PHLQKVLASI AQRIQDNPEL 
VTSDFLRRWE RRGDMEGKPL RLYLANSQGQ VINTSRVSRG VRSFMLMTDE EKQPISHQFK
DELVFGPHQF TLQGETYYLY GRLPDIHPRP WFFFFIENKL LTLSLAIVLS GLLCAILAWH
LGKPLNSLKK SADALAEGDL SNRVDKATTQ RNDEIGQLAT AFNSMADSIE AMVKNQQRLM
GDISHELRTP LTRLQLSLAL ARKKGQQTTE TDRIAYEAEQ LEKLIAELLE LSRVKLSTNE
TKVRLGLAES LSQVLDDAEF EADQQGKKIT IDIDEAIELS HYPKSLSRAI ENLLRNAIRY
AQSDIHLLAS QANGQVQITI KDDGPGIDPA ELEAIFKPFY RPDSARQRES GGWGLGLAIT
EAAISAHKGK IRAENRQPHG LEVNISLPT