| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0251 |
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| Symbol | |
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| ID | 4479159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 282029 |
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| End bp | 283915 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639724783 |
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| Product | Fis family GAF modulated sigma54 specific transcriptional regulator |
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| Protein accession | YP_867900 |
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| Protein GI | 117918708 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000000347396 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAGCAGC GCTCGGGGAG CTTGGCTATG ACAGTAAAAC TGCATTTTCC AACCACACAG
GCATGGTTAA CCGATTCATG GCAGCGCAGC TTAGGTGCTG GCTTGTCAGA GTTTCGTGCC
GGTGAGGATC TCAGGCTCAC GCGTTCGGAG CTCAAATATA AACATGAGCA ATATCAGCAG
CTCATCGAAT TAGTACAATC CCACGCCTTG CCGCTATTTA ATCAACTGAT GGCGCACTCT
AATAGTCGAT TATTGCTCTC CGATGCCGAC GGTTATGTGC TGAAACATTG GGGGGTGAGC
CGCTATTCCA GCAAGCTGGC GGATGTGGCG CTCGATATTG GGGTCAACTG GCTCGAAAAG
TATAAGGGCA CCAATGCAAT AGGCACAGCG CTCACGGCCA AGCAGGCGGT GTCAGTGGTC
GGCGAGCAGC ATTTTATCCG CCAAAACCGT TTTATGAGTT GCACCGCTTG CCCGATTTTT
TCGCCCCAAG GTGAGATGCT CGGAGTGCTT GATATTACCA GTGAGCAGCA ACGGCATTCG
CAGCAAACCT TAATGCTAGT GTCGAGTCTG GCGCAGCAGG TCGAAACGGC GCTGCTGTGT
CATCTACCCG ATAGTCATTA TCGAATCGAT TTCGCGGCGC AGCCGAGTCT ATTAAATTCC
GGCTGGCAAG GCATAGTTAT CGCTAGCAGT GACGGGCGGA TTGTGGGTTG TAATCCCATG
GCGAAACAAC TGCTGAGCCA AGCCAAGTTG GGTGACAGTT TAGATCAACA CCTCGGCGAC
AATTGGGCGC GAGCGGGGGG CTTTCATCGC GATTCGGCGC TGCATGTGCA GACGCAAGCA
TTGGCACTGA CGCAGACGAA AAGTACCAGA ACCCTTCAAG ATAAACCCTT GAACCAATTG
GGTGTCAGGT TTCGTGACCC ATTACTTGAG CGTGCCTGGC AGCAGGCGAA CAAGGTGATC
ACTAAGCAAA TTCCTTTACT TGTGCTTGGC GAAACGGGTG TCGGTAAGGA GCAATTTGTG
AAAAAGCTCC ACGCCCAGAG TACCCGCCGC GCACAGCCCA TAGTTGCAGT AAATTGCGCC
GCCTTGCCCG CTGAGTTAGT TGAGTCTGAG TTATTTGGCT ATCAGGCGGG AGCTTTTACT
GGCGCCAATC GAACTGGTTT TATCGGTAAG ATCCGCCAGG CACACGGCGG CTTTTTGTTC
CTCGATGAAA TTGGCGAGAT GCCGCTAGCG GCGCAGAGTC GTTTACTCCG GGTGCTACAG
GAGCGCGAGG TGGTCCCCGT CGGCAGTAAT CAAAGTTTTA AGGTCGATAT TCAGATCATC
GCCGCGACCC ATATGGACTT AGAGTCGCTG GTGGCGCAGG GGTTGTTCCG TCAGGATTTG
TTTTATCGCC TGAATGGATT GCAGGTGCGG CTGCCTGCGC TGCGTGAGCG GCAGGATATT
GAGCGCATCA TCCATAAATT GCACCGCCGT CACCGCAGCA GCGCGCAAAC CTTGTGTACT
GAGCTGTTGG CGCAACTGAT GCGTTACGAT TGGCCCGGCA ACCTAAGGGA GCTGGATAAT
CTGATGCAGG TGGCTTGTTT GATGGCCGAA GGTGAAGCTG TACTCGAGAT CAATCATCTC
CCCGATTACC TTGCTCAAAA GCTAATGAAT CTGGCGTGTG AGCCCCAAAC TTTAACTGAG
GTTGCTGACG CAGAAGCTAC GGCGCATCCG CACGAGCTGG TTGAGTCTAG CTCCGTCACC
ATCGACTCGC TCCACGGAAC CATTAATCTG AATGTGTTGC AGGCTTACCG TGCCTGCGAT
GGCAATGTGA GCCAATGCGC CAAGCGTTTG GGGATTAGCC GTAATGCCTT GTATCGCAAG
TTAAAACAGC TAGGGATTAA GGATTAA
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| Protein sequence | MEQRSGSLAM TVKLHFPTTQ AWLTDSWQRS LGAGLSEFRA GEDLRLTRSE LKYKHEQYQQ
LIELVQSHAL PLFNQLMAHS NSRLLLSDAD GYVLKHWGVS RYSSKLADVA LDIGVNWLEK
YKGTNAIGTA LTAKQAVSVV GEQHFIRQNR FMSCTACPIF SPQGEMLGVL DITSEQQRHS
QQTLMLVSSL AQQVETALLC HLPDSHYRID FAAQPSLLNS GWQGIVIASS DGRIVGCNPM
AKQLLSQAKL GDSLDQHLGD NWARAGGFHR DSALHVQTQA LALTQTKSTR TLQDKPLNQL
GVRFRDPLLE RAWQQANKVI TKQIPLLVLG ETGVGKEQFV KKLHAQSTRR AQPIVAVNCA
ALPAELVESE LFGYQAGAFT GANRTGFIGK IRQAHGGFLF LDEIGEMPLA AQSRLLRVLQ
EREVVPVGSN QSFKVDIQII AATHMDLESL VAQGLFRQDL FYRLNGLQVR LPALRERQDI
ERIIHKLHRR HRSSAQTLCT ELLAQLMRYD WPGNLRELDN LMQVACLMAE GEAVLEINHL
PDYLAQKLMN LACEPQTLTE VADAEATAHP HELVESSSVT IDSLHGTINL NVLQAYRACD
GNVSQCAKRL GISRNALYRK LKQLGIKD
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