| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0248 |
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| Symbol | |
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| ID | 4479156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 278282 |
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| End bp | 279199 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639724780 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_867897 |
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| Protein GI | 117918705 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000000146756 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAAGATA GACTACAAGC CATGCAAATT TTTATGCGAG TGGCTGAATT AGAGAGTTTT
ACTCAAGCCA GTATCAGCCT TGGTCTGTCG AAAACCCATG TGTCGAATGT CGTAGCTCAG
TTCGAAACCG CACTAGGTGC ACGCTTACTA CAACGCACCA CTCGCACGGT GCGCCTCACT
CAAGACGGCA TAAGTTGTTA TGAGCGCTGC AAAAACTTGC TCACCGACTA TCAAGAATTA
GAAAGCCTTT TCCAGCTACA GGCGACGCAA ATTTCGGGGC GCTTAAGAGT CGATATGTCT
ACAGGGATTG CGCGCAACTT AGTGCTTCCT CATCTTCCTG ACTTTATTGA ACAATATCCC
CAAATTGAGT TGGAGCTAAG CAGCACCGAC CGTAAAGTCG ATATTGTCGC CGAAGGTTTT
GACTGCGTGA TCCGCGTTGG CAGCGTGCAG CAAGAAGGCG TTATCGCTAA AAAGATTGGC
CACTTTAAGA TGCTCAATTG TGTCAGCCCA AGCTACATCA CAAAATACGG CAGACCCTCG
AATATAGAAG AACTTAGCCA TGGGCATAAG CTTATCCACT ACGTTGGCCA GTTAGGCGGC
AGTGATTCAG GATTTGAGTA TCTGAGCCAA GATAACCACG AACTATGCGC CCTAGCCTTA
CCTAAGCTAA TCACAGTCAA TAATGCCGAT GCCTACAGCG CGGCCTGCCT AGCGGGATTA
GGGATTATTC AAGCGCCGAA TATTGGGGTG GCAAAATATC TCCAAACCGG AGAACTGATT
GAGATCCTGC CAGATTACCC AGCCCCCTCA ATGCCAGTGA GCCTGCTCTA TCCCCATAGA
CGACATCTTT CTAAAAGACT TCAGGTATTT ATGGCTTGGT TGACCGAGCT GCTAACGCCT
TTTTTAGTAT CGCGTTAA
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| Protein sequence | MQDRLQAMQI FMRVAELESF TQASISLGLS KTHVSNVVAQ FETALGARLL QRTTRTVRLT
QDGISCYERC KNLLTDYQEL ESLFQLQATQ ISGRLRVDMS TGIARNLVLP HLPDFIEQYP
QIELELSSTD RKVDIVAEGF DCVIRVGSVQ QEGVIAKKIG HFKMLNCVSP SYITKYGRPS
NIEELSHGHK LIHYVGQLGG SDSGFEYLSQ DNHELCALAL PKLITVNNAD AYSAACLAGL
GIIQAPNIGV AKYLQTGELI EILPDYPAPS MPVSLLYPHR RHLSKRLQVF MAWLTELLTP
FLVSR
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