| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0245 |
|---|
| Symbol | |
|---|
| ID | 4479153 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 276543 |
|---|
| End bp | 277139 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 639724777 |
|---|
| Product | cytochrome B561 |
|---|
| Protein accession | YP_867894 |
|---|
| Protein GI | 117918702 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3658] Cytochrome b |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.00000000164919 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTCAA ATATGCAGCA AAACATCAAA GTCTGGGATC CCTTGATCCG TATCTTTCAC
TGGTCATTGG TGGGCTTTTT TACCTTAGCC TACCTCACCG AAGGTGAAGA CGAATGGATG
AATATCCATA GTTACGCCGG CTACAGCATC TTAACCCTGC TGGTATTTCG CCTGTTATGG
GGCGTTATTG GCACTCACCA TGCGCGTTTT ATCAACTTTG TTACCCGTCC GAGCATCGCA
TGGGCATACC TGAAGGAACT GTTCACGGGC AAGGCTAAGG ATTACATCGG CCACAATCCC
GCAGGCGCAC TGATGATAGT CGCCCTGATC CTCAGCATAG GGTTCACTGG CTTCTCCGGC
ATGGCGCTTT ATGCCACCGA TGGCCAAGGT CCACTGGCCA CAAGCTTTTT CGCCACTTGG
CCCGAGGGCG CCCTGAAGGA AGTGCATGAG TTTTTCGCCA ACTTCAGCCT GCTTCTTATC
GTCACCCATG TCGGCGGCGT GATCGTCAGC AGCCTGCTGC ATAAGGAAAA CCTCGTCAAA
GCCATGCTGA CAGGTAAAAA GCAGCGCCAA CTGATCCAAC AAGATGAACA TCAATAA
|
|---|
| Protein sequence | MSSNMQQNIK VWDPLIRIFH WSLVGFFTLA YLTEGEDEWM NIHSYAGYSI LTLLVFRLLW
GVIGTHHARF INFVTRPSIA WAYLKELFTG KAKDYIGHNP AGALMIVALI LSIGFTGFSG
MALYATDGQG PLATSFFATW PEGALKEVHE FFANFSLLLI VTHVGGVIVS SLLHKENLVK
AMLTGKKQRQ LIQQDEHQ
|
|---|
| |