Gene Shewana3_0239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0239 
Symbol 
ID4476487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp272673 
End bp273185 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content44% 
IMG OID639724771 
Producthypothetical protein 
Protein accessionYP_867888 
Protein GI117918696 
COG category[S] Function unknown 
COG ID[COG3812] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000143934 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTTTATG ATTTAACGGC TGTTCAATTT AGCAAGATGC TGAAAAATTT GAGTCTTATT 
CTGGAGAAGG GTGAGGTTTT TGCCAACTTG AAGAAGGTGG ATATGGCGGT ATTATTGAAT
TCCCGCTTAG CACCCGATCA ATTTAATCTG ATCCGTCAGA TCCAGATCGC CTGTGATACC
GCTAAGATTG GGGTCGCACG TCTGACGGGT AATTTAGAAA CTGTGCCTAA GCATGATGAT
ACTGAAACGA CGTTACCTGA GCTGCAGGCG CGTATTGCTT CTGTTATCGA GTACTTGTCT
CAATTTACCG AGGCAGATTT TGCCGATGCG GCGACTATCC ATGTTTCTCA ACCTCGTTGG
GAAGGTAAGT ATTTGACAGG GTACGAGTTT GCGATTGAGC ATGCTATCCC AAACTTATAT
TTCCATGTGA CGACAGCTTA TGCGATTTTG CGCCATAACG GTGTGGATGT GGGTAAGAAA
GATTATCTTG GCCCTATGCC TTACAAATCA TAA
 
Protein sequence
MLYDLTAVQF SKMLKNLSLI LEKGEVFANL KKVDMAVLLN SRLAPDQFNL IRQIQIACDT 
AKIGVARLTG NLETVPKHDD TETTLPELQA RIASVIEYLS QFTEADFADA ATIHVSQPRW
EGKYLTGYEF AIEHAIPNLY FHVTTAYAIL RHNGVDVGKK DYLGPMPYKS