| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0233 |
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| Symbol | |
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| ID | 4476478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 261588 |
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| End bp | 262835 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 639724762 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_867883 |
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| Protein GI | 117918691 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4235] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR03142] cytochrome c-type biogenesis protein CcmI |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0207631 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000607109 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGACGACAT TTTGGATTTT TATTGCGCTT GTTGTGTTGG TCAGCTTAAC GCTGATCTGG
ATCCCGCATT TCAGACAGCA AAAGTTGTTA CGCACTGAAG AAGCCGGCGT TCGCAGACAA
ACTAACCTTG AATTGTTCAA TGAACGTCTT GCCACTCTTG AGAAAGAACT CAATGAAGAA
CTGCTCGACC AAGCTGAATT TGATGCACTG AAGAAAGAGC TAGAAATCAG CCTGCTCCAA
GACATCAAAC AAGCGAGCGA TGATTCACTC GTCAACCAGA TCAAACCTAA GAGCATTTTA
TGGCCATCGG TCATGTCGGT CTGCTTGATT GCGATTTCAG GTTACCTCTA TCAGCACTTG
GGTGCCTTTG AGAATATCGG CAACACCCAA CCTGCTAACC CACATGCGGG TATGGACGCG
GCGCAAATCA TGGCACAACG CGTACAGATG ATGGAGGCAC AAGTACAAGC CGAGCCTGAA
AACAGCCAAG CTTGGTTCAG CCTAGGTCAC GCTTATATCT CTGCTAACCA ATTCGATAAA
GCCGTTGCAG CCTTCGATAA GGTGATGGAA TTAGTCGGTA AACACGCTGA ATTAATTGGT
CCAAAAGCAA CAGCTATGTA CTATAAAGCG GGTCAGCAAA TGACTCCGCA AATTCAAGCT
TTAATTGATG AATCTTTAGC GTTAGATCCA CAGGATCCAT CAACCTTACT GCTCGTCGGT
ATGGATGCTT TCTTCACTGC TAACTATCAA AAAGCCATTG ATTCATGGCA AACCATTCTC
AATAGCGACC GCACCGATGT AGACCGCGCC GCGCTGATGA ATGCCATTGA AACGGCAAAC
CTGCGTATGC AAGGCGAAAC CGCGGGCATG CCTAACGATG ATGTCCACAA GCAGGCAAAA
GTTGCGACTA AGTCTGTAAG TATTGCGATT TCAATTTCAC CCGAACTGGC CGCACAAGCA
GGCCCTGATG ACACTATCTT CGTCTTCGCC CGTGCGACCG AAGGTCCTAA AGTGCCATTA
GCGGCAACTA AGGTGAGCGC AAAAACTTTA CCGGTAACAG TAACGCTCGA TGACAGCACA
GGTATGGGTG GCGATGTGAA ACTGAGCCAA ACTGCGAGTG TTGAAGTGAT CGCGGTGTTG
TCTAAGCATG GCAATATCAA ACCTCAGGCA GGTGATATTC AAGGCAAAGT CAGCAAAGTA
AATGTGGGTG ACACTGCAAG CTTAGTGTTA GATACCCAAG TGCAATAA
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| Protein sequence | MTTFWIFIAL VVLVSLTLIW IPHFRQQKLL RTEEAGVRRQ TNLELFNERL ATLEKELNEE
LLDQAEFDAL KKELEISLLQ DIKQASDDSL VNQIKPKSIL WPSVMSVCLI AISGYLYQHL
GAFENIGNTQ PANPHAGMDA AQIMAQRVQM MEAQVQAEPE NSQAWFSLGH AYISANQFDK
AVAAFDKVME LVGKHAELIG PKATAMYYKA GQQMTPQIQA LIDESLALDP QDPSTLLLVG
MDAFFTANYQ KAIDSWQTIL NSDRTDVDRA ALMNAIETAN LRMQGETAGM PNDDVHKQAK
VATKSVSIAI SISPELAAQA GPDDTIFVFA RATEGPKVPL AATKVSAKTL PVTVTLDDST
GMGGDVKLSQ TASVEVIAVL SKHGNIKPQA GDIQGKVSKV NVGDTASLVL DTQVQ
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