Gene Shewana3_0222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0222 
Symbol 
ID4476467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp254422 
End bp254814 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content48% 
IMG OID639724751 
Product30S ribosomal protein S11 
Protein accessionYP_867872 
Protein GI117918680 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0100] Ribosomal protein S11 
TIGRFAM ID[TIGR03632] 30S ribosomal protein S11 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000251222 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000422157 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGCTAAAG TTCCGTCACG TTCTCCGCGT AAGCGCGTAC GTAAACAGGT TGCAGATGGC 
ATGGCTCATA TCCATGCTTC TTTCAACAAC ACAATTGTCA CCATTACAGA TCGTCAAGGT
AATGCGTTGT CATGGGCTAC TTCAGGTGGT TCAGGTTTCC GTGGTTCACG TAAATCTACG
CCATTTGCTG CACAGGTAGC TGCTGAGCGT GCAGGTGCTG CTGCTCAAGA CTACGGTTTA
AAAAACCTTG AAGTGTTTGT GAAGGGTCCA GGTCCAGGTC GTGAATCAGC CATTCGTGCG
CTGAACGCTG TTGGTTATAA AATTACCAAC ATTACCGATG TGACGCCGAT CCCTCATAAT
GGTTGTCGTC CTCCTAAAAA GCGTCGTGTA TAA
 
Protein sequence
MAKVPSRSPR KRVRKQVADG MAHIHASFNN TIVTITDRQG NALSWATSGG SGFRGSRKST 
PFAAQVAAER AGAAAQDYGL KNLEVFVKGP GPGRESAIRA LNAVGYKITN ITDVTPIPHN
GCRPPKKRRV