| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0219 |
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| Symbol | secY |
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| ID | 4476464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 252460 |
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| End bp | 253800 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 639724748 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_867869 |
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| Protein GI | 117918677 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000110874 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000000176689 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCAAAAC CAGGACTTGA TTTAAAAAGC GCGAAAGGTG GACTTTCTGA GTTGAAAGCT
CGCCTCCTGT TCGTGATTGG TGCGATTATC GTCTTTAGAG CCGGTTCGTT TGTGCCAATT
CCTGGTATTG ACGCAGCTGT ATTAGCAGAG CTGTTTGCTC AGCAAAAAGG TACCATCCTT
GGCATGTTCA ACATGTTCTC GGGTGGTGCT CTTTCCCGTG CTTCTATCTT TGCATTAGGT
ATCATGCCGT ACATTTCGGC ATCGATTATC ATGCAGTTAT TGACTGTGGT GCATCCAGCA
CTCGCTGAAT TGAAAAAAGA AGGCGAGTCT GGACGTAAAA AAATCAGTCA GTACACACGT
TGGGGTACGT TGGTGCTGGG TACATTCCAG TCGATCGGTA TTGCAACAGG GTTACCAAAC
TTAGTCCCAG GCCTAGTGGT CAACATTGGA TTCGGTTTCT ACTTTGTTGC GGTTGTGAGC
TTAGTAACAG GAACCATGTT CCTGATGTGG CTAGGTGAGC AAATTACCGA ACGAGGTATA
GGTAACGGTA TCTCGATTTT AATTTTCGCA GGTATTGTTG CTGGATTACC TTCCGCTATC
GGCCAAACGG CTGAGCAGGC GCGTCAAGGT GACCTGAATG TGTTAGTATT GTTGTTGCTC
GCGGTAATTA TTTTTGCTGT GACTTATTTC GTGGTGTTTG TAGAACGTGG TCAACGTCGT
ATCGTTGTTA ACTACGCTAA GCGCCAGCAA GGCCGTAAGG TATTCGCTGC GCAATCTACT
CACTTGCCGC TGAAAATAAA CATGGCGGGT GTAATTCCTC CAATTTTTGC GTCAAGCATC
ATTTTGTTCC CAGGCACACT GGCTCAGTGG TTTGGTCAAA ATGAGTCTAT GTCATGGTTA
AGTGATTTTT CACTGGCCGT GTCACCAGGA CAACCGCTTT ACTCATTATT GTATGCAGCA
GCGATTATCT TCTTCTGTTT CTTCTATACT GCGTTGGTAT TTAACCCACG TGAAACAGCA
GATAACCTGA AGAAGAGTGG TGCATTCATC CCTGGGATCC GTCCTGGAGA ACAGACTTCG
CGTTACATTG ATAAAGTAAT GACTCGCCTG ACATTAGCTG GCGCGTTATA CATTACCTTT
ATCTGTTTAA TTCCGGAGTT CATGTTAATT GCGTGGAAAG TACAGTTCTA TTTTGGCGGT
ACTTCACTAC TAATTATGGT AGTCGTAATC ATGGACTTCA TGGCTCAGGT TCAGACCCAT
ATGATGTCAC ATCAGTATGA GTCTGTGATG AAGAAAGCTA ACCTAGTAAA CAAAGCGAAC
TTAGATCGCT TTGGTCGCTA A
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| Protein sequence | MAKPGLDLKS AKGGLSELKA RLLFVIGAII VFRAGSFVPI PGIDAAVLAE LFAQQKGTIL
GMFNMFSGGA LSRASIFALG IMPYISASII MQLLTVVHPA LAELKKEGES GRKKISQYTR
WGTLVLGTFQ SIGIATGLPN LVPGLVVNIG FGFYFVAVVS LVTGTMFLMW LGEQITERGI
GNGISILIFA GIVAGLPSAI GQTAEQARQG DLNVLVLLLL AVIIFAVTYF VVFVERGQRR
IVVNYAKRQQ GRKVFAAQST HLPLKINMAG VIPPIFASSI ILFPGTLAQW FGQNESMSWL
SDFSLAVSPG QPLYSLLYAA AIIFFCFFYT ALVFNPRETA DNLKKSGAFI PGIRPGEQTS
RYIDKVMTRL TLAGALYITF ICLIPEFMLI AWKVQFYFGG TSLLIMVVVI MDFMAQVQTH
MMSHQYESVM KKANLVNKAN LDRFGR
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