| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0208 |
|---|
| Symbol | rpsQ |
|---|
| ID | 4477980 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 247998 |
|---|
| End bp | 248246 |
|---|
| Gene Length | 249 bp |
|---|
| Protein Length | 82 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 639724737 |
|---|
| Product | 30S ribosomal protein S17 |
|---|
| Protein accession | YP_867858 |
|---|
| Protein GI | 117918666 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0186] Ribosomal protein S17 |
|---|
| TIGRFAM ID | [TIGR03635] 30S ribosomal protein S17 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000159917 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.0000000011379 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGATA AAATCCGTAC TTTGCAAGGT CGTGTGACAA GCAACAAAAT GGATAAAACC
ATTACTGTAG CTATCGAACG CCAAGTGAAA CACCCAATCT ATGGGAAGTA CATTAAGCGT
ACGACTAAGA TCCATGCACA CGATGAAGCT AATCAGTGCA ACGAAGGCGA TGTAGTAGCG
ATCCGCGAAT GTCGTCCTCT GTCTAAGACT AAATCTTGGA CTCTGGTTGA AGTAGTATCA
AAGGCCTAA
|
|---|
| Protein sequence | MSDKIRTLQG RVTSNKMDKT ITVAIERQVK HPIYGKYIKR TTKIHAHDEA NQCNEGDVVA
IRECRPLSKT KSWTLVEVVS KA
|
|---|
| |