Gene Shewana3_0197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0197 
Symbol 
ID4477969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp241777 
End bp242961 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content48% 
IMG OID639724726 
Productelongation factor Tu 
Protein accessionYP_867847 
Protein GI117918655 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000214684 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000334083 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGCAAAAG CTAAATTTGA ACGTAATAAG CCTCACGTGA ACGTGGGCAC CATCGGTCAC 
GTTGACCATG GTAAAACCAC TCTGACTGCA GCTATCTCTC ACGTACTGGC TAAGACCTAC
GGTGGTGAAG CTAAAGACTT CTCTCAAATC GATAACGCTC CAGAAGAGCG TGAGCGCGGT
ATTACCATCA ATACCTCTCA CATCGAATAC GATACACCAA CTCGCCATTA CGCACACGTA
GACTGCCCAG GCCACGCTGA CTATGTTAAA AACATGATCA CTGGTGCTGC ACAGATGGAC
GGCGCGATCC TGGTAGTAGC TTCTACTGAC GGTCCAATGC CACAAACACG TGAGCACATC
CTGCTGTCTC GCCAAGTAGG CGTACCATTC ATCATCGTAT TCATGAACAA ATGTGACATG
GTTGACGATG CTGAGCTGTT AGAATTAGTA GAAATGGAAG TACGTGAACT GTTATCAGAA
TACGACTTCC CAGGTGATGA CTTACCAGTT ATCCAAGGTT CTGCTCTGAA AGCGCTTGAA
GGCGAGCCAG AGTGGGAAGC TAAGATCATC GAATTAGCCG CTGCACTGGA TTCTTACATT
CCAGAACCAG AGCGTGATAT CGATAAGCCA TTCCTGATGC CAATCGAAGA CGTATTCTCA
ATCTCTGGCC GTGGTACAGT AGTAACAGGT CGTGTTGAGC GTGGTATCGT ACGTGTTGGT
GACGAAGTAG AAATCGTTGG TATCCGTGCA ACTACTAAGA CAACCTGTAC TGGTGTTGAA
ATGTTCCGTA AGCTGCTTGA CGAAGGTCGT GCAGGTGAGA ACTGTGGTAT CCTGTTACGT
GGTACTAAGC GTGATGACGT AGAACGTGGT CAAGTATTAT CTAAGCCAGG TTCAATCAAC
CCACACACTA CTTTTGAATC AGAAGTATAC GTTCTGTCAA AAGAAGAAGG TGGTCGTCAC
ACTCCATTCT TCAAAGGCTA CCGTCCACAG TTCTACTTCC GTACAACTGA CGTGACAGGT
ACTATCGAAC TGCCAGAAGG CGTAGAGATG GTAATGCCAG GCGACAACAT CAAGATGAAA
GTGACTCTGA TCTGCCCAAT CGCGATGGAC GAAGGTTTAC GCTTCGCAAT CCGTGAAGGT
GGCCGTACAG TAGGCGCTGG TGTTGTAGCT AAGATTTTCG CTTAA
 
Protein sequence
MAKAKFERNK PHVNVGTIGH VDHGKTTLTA AISHVLAKTY GGEAKDFSQI DNAPEERERG 
ITINTSHIEY DTPTRHYAHV DCPGHADYVK NMITGAAQMD GAILVVASTD GPMPQTREHI
LLSRQVGVPF IIVFMNKCDM VDDAELLELV EMEVRELLSE YDFPGDDLPV IQGSALKALE
GEPEWEAKII ELAAALDSYI PEPERDIDKP FLMPIEDVFS ISGRGTVVTG RVERGIVRVG
DEVEIVGIRA TTKTTCTGVE MFRKLLDEGR AGENCGILLR GTKRDDVERG QVLSKPGSIN
PHTTFESEVY VLSKEEGGRH TPFFKGYRPQ FYFRTTDVTG TIELPEGVEM VMPGDNIKMK
VTLICPIAMD EGLRFAIREG GRTVGAGVVA KIFA